Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 FRS2YFL022C 1512 nt5.69□□□□□ -1.5
TY2A-LR1P0C2J4 IMA2YOL157C 1770 nt5.68□□□□□ -1.5
TY2A-LR1P0C2J4 PHB1YGR132C 864 nt5.68□□□□□ -1.5
TY2A-LR1P0C2J4 ICT1YLR099C 1185 nt5.68□□□□□ -1.5
TY2A-LR1P0C2J4 ZRT2YLR130C 1269 nt5.68□□□□□ -1.5
TY2A-LR1P0C2J4 RPC19YNL113W 429 nt5.68□□□□□ -1.5
TY2A-LR1P0C2J4 CTR1YPR124W 1221 nt5.68□□□□□ -1.5
TY2A-LR1P0C2J4 MCM3YEL032W 2916 nt5.68□□□□□ -1.5
TY2A-LR1P0C2J4 UGO1YDR470C 1509 nt5.68□□□□□ -1.5
TY2A-LR1P0C2J4 PFK2YMR205C 2880 nt5.68□□□□□ -1.5
TY2A-LR1P0C2J4 NMT1YLR195C 1368 nt5.67□□□□□ -1.5
TY2A-LR1P0C2J4 ATG32YIL146C 1590 nt5.67□□□□□ -1.5
TY2A-LR1P0C2J4 QRI1YDL103C 1434 nt5.67□□□□□ -1.5
TY2A-LR1P0C2J4 MRS1YIR021W 1092 nt5.67□□□□□ -1.5
TY2A-LR1P0C2J4 CIS3YJL158C 684 nt5.67□□□□□ -1.5
TY2A-LR1P0C2J4 IMA5YJL216C 1746 nt5.67□□□□□ -1.5
TY2A-LR1P0C2J4 PYK2YOR347C 1521 nt5.67□□□□□ -1.5
TY2A-LR1P0C2J4 HER2YMR293C 1395 nt5.67□□□□□ -1.5
TY2A-LR1P0C2J4 YEL028WYEL028W 462 nt5.66□□□□□ -1.5
TY2A-LR1P0C2J4 LEU5YHR002W 1074 nt5.66□□□□□ -1.5
TY2A-LR1P0C2J4 EFM3YJR129C 1020 nt5.66□□□□□ -1.5
TY2A-LR1P0C2J4 APN1YKL114C 1104 nt5.66□□□□□ -1.5
TY2A-LR1P0C2J4 YET2YMR040W 483 nt5.66□□□□□ -1.5
TY2A-LR1P0C2J4 NPT1YOR209C 1290 nt5.66□□□□□ -1.5
TY2A-LR1P0C2J4 YPL014WYPL014W 1146 nt5.66□□□□□ -1.5
TY2A-LR1P0C2J4 ADE12YNL220W 1302 nt5.66□□□□□ -1.5
TY2A-LR1P0C2J4 YIL055CYIL055C 1884 nt5.66□□□□□ -1.5
TY2A-LR1P0C2J4 PDR18YNR070W 4002 nt5.65□□□□□ -1.5
TY2A-LR1P0C2J4 NUP1YOR098C 3231 nt5.65□□□□□ -1.5
TY2A-LR1P0C2J4 CNE1YAL058W 1509 nt5.65□□□□□ -1.5
TY2A-LR1P0C2J4 FRE7YOL152W 1863 nt5.65□□□□□ -1.5
TY2A-LR1P0C2J4 HST4YDR191W 1113 nt5.65□□□□□ -1.5
TY2A-LR1P0C2J4 YDR541CYDR541C 1035 nt5.65□□□□□ -1.5
TY2A-LR1P0C2J4 QCR6YFR033C 444 nt5.65□□□□□ -1.5
TY2A-LR1P0C2J4 LYS21YDL131W 1323 nt5.65□□□□□ -1.51
TY2A-LR1P0C2J4 RIO1YOR119C 1455 nt5.64□□□□□ -1.51
TY2A-LR1P0C2J4 PRI2YKL045W 1587 nt5.64□□□□□ -1.51
TY2A-LR1P0C2J4 LAP2YNL045W 2016 nt5.64□□□□□ -1.51
TY2A-LR1P0C2J4 COX9YDL067C 180 nt5.64□□□□□ -1.51
TY2A-LR1P0C2J4 COX20YDR231C 618 nt5.64□□□□□ -1.51
TY2A-LR1P0C2J4 SUP2tY(GUA)D 75 nt5.64□□□□□ -1.51
TY2A-LR1P0C2J4 SUP11tY(GUA)F1 75 nt5.64□□□□□ -1.51
TY2A-LR1P0C2J4 SUP6tY(GUA)F2 75 nt5.64□□□□□ -1.51
TY2A-LR1P0C2J4 SUP7tY(GUA)J1 75 nt5.64□□□□□ -1.51
TY2A-LR1P0C2J4 SUP4tY(GUA)J2 75 nt5.64□□□□□ -1.51
TY2A-LR1P0C2J4 SUP5tY(GUA)M1 75 nt5.64□□□□□ -1.51
TY2A-LR1P0C2J4 SUP8tY(GUA)M2 75 nt5.64□□□□□ -1.51
TY2A-LR1P0C2J4 SUP3tY(GUA)O 75 nt5.64□□□□□ -1.51
TY2A-LR1P0C2J4 YNR040WYNR040W 771 nt5.64□□□□□ -1.51
TY2A-LR1P0C2J4 ENV7YPL236C 1095 nt5.64□□□□□ -1.51
TY2A-LR1P0C2J4 PRP24YMR268C 1335 nt5.64□□□□□ -1.51
TY2A-LR1P0C2J4 PXL1YKR090W 2121 nt5.63□□□□□ -1.51
TY2A-LR1P0C2J4 RTN1YDR233C 888 nt5.63□□□□□ -1.51
TY2A-LR1P0C2J4 DBR1YKL149C 1218 nt5.63□□□□□ -1.51
TY2A-LR1P0C2J4 MRPS5YBR251W 924 nt5.63□□□□□ -1.51
TY2A-LR1P0C2J4 SLD2YKL108W 1362 nt5.63□□□□□ -1.51
TY2A-LR1P0C2J4 GEX2YKR106W 1848 nt5.62□□□□□ -1.51
TY2A-LR1P0C2J4 CTF18YMR078C 2226 nt5.62□□□□□ -1.51
TY2A-LR1P0C2J4 RPN11YFR004W 921 nt5.62□□□□□ -1.51
TY2A-LR1P0C2J4 YML012C-AYML012C-A 378 nt5.62□□□□□ -1.51
TY2A-LR1P0C2J4 RPN7YPR108W 1290 nt5.62□□□□□ -1.51
TY2A-LR1P0C2J4 ISR1YPR106W 1332 nt5.62□□□□□ -1.51
TY2A-LR1P0C2J4 MST1YKL194C 1389 nt5.62□□□□□ -1.51
TY2A-LR1P0C2J4 AFG1YEL052W 1530 nt5.62□□□□□ -1.51
TY2A-LR1P0C2J4 HIS7YBR248C 1659 nt5.62□□□□□ -1.51
TY2A-LR1P0C2J4 TAH18YPR048W 1872 nt5.62□□□□□ -1.51
TY2A-LR1P0C2J4 YOL036WYOL036W 2286 nt5.62□□□□□ -1.51
TY2A-LR1P0C2J4 RAP1YNL216W 2484 nt5.62□□□□□ -1.51
TY2A-LR1P0C2J4 SIT4YDL047W 936 nt5.61□□□□□ -1.51
TY2A-LR1P0C2J4 SUP19tS(UGA)E 82 nt5.61□□□□□ -1.51
TY2A-LR1P0C2J4 SUP17tS(UGA)I 82 nt5.61□□□□□ -1.51
TY2A-LR1P0C2J4 SUP16tS(UGA)P 82 nt5.61□□□□□ -1.51
TY2A-LR1P0C2J4 ECM19YLR390W 339 nt5.61□□□□□ -1.51
TY2A-LR1P0C2J4 PPA2YMR267W 933 nt5.61□□□□□ -1.51
TY2A-LR1P0C2J4 PDB1YBR221C 1101 nt5.61□□□□□ -1.51
TY2A-LR1P0C2J4 RSA4YCR072C 1548 nt5.6□□□□□ -1.51
TY2A-LR1P0C2J4 DHH1YDL160C 1521 nt5.6□□□□□ -1.51
TY2A-LR1P0C2J4 PPM1YDR435C 987 nt5.6□□□□□ -1.51
TY2A-LR1P0C2J4 SKI8YGL213C 1194 nt5.6□□□□□ -1.51
TY2A-LR1P0C2J4 DJP1YIR004W 1299 nt5.6□□□□□ -1.51
TY2A-LR1P0C2J4 YJU3YKL094W 942 nt5.6□□□□□ -1.51
TY2A-LR1P0C2J4 YML6YML025C 861 nt5.6□□□□□ -1.51
TY2A-LR1P0C2J4 MNS1YJR131W 1650 nt5.59□□□□□ -1.51
TY2A-LR1P0C2J4 SEM1YDR363W-A 270 nt5.59□□□□□ -1.51
TY2A-LR1P0C2J4 HAP2YGL237C 798 nt5.59□□□□□ -1.51
TY2A-LR1P0C2J4 ADD37YMR184W 597 nt5.59□□□□□ -1.51
TY2A-LR1P0C2J4 GIP2YER054C 1647 nt5.59□□□□□ -1.52
TY2A-LR1P0C2J4 SAS4YDR181C 1446 nt5.58□□□□□ -1.52
TY2A-LR1P0C2J4 RAD3YER171W 2337 nt5.58□□□□□ -1.52
TY2A-LR1P0C2J4 VHS1YDR247W 1386 nt5.58□□□□□ -1.52
TY2A-LR1P0C2J4 RPE1YJL121C 717 nt5.58□□□□□ -1.52
TY2A-LR1P0C2J4 MRPL4YLR439W 960 nt5.58□□□□□ -1.52
TY2A-LR1P0C2J4 PEX12YMR026C 1200 nt5.58□□□□□ -1.52
TY2A-LR1P0C2J4 UBC11YOR339C 471 nt5.58□□□□□ -1.52
TY2A-LR1P0C2J4 LCB2YDR062W 1686 nt5.58□□□□□ -1.52
TY2A-LR1P0C2J4 RPT1YKL145W 1404 nt5.57□□□□□ -1.52
TY2A-LR1P0C2J4 PKC1YBL105C 3456 nt5.57□□□□□ -1.52
TY2A-LR1P0C2J4 VPS4YPR173C 1314 nt5.57□□□□□ -1.52
TY2A-LR1P0C2J4 snR82snR82 268 nt5.57□□□□□ -1.52
TY2A-LR1P0C2J4 IPK1YDR315C 846 nt5.57□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms