Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.28■□□□□ 0.84
SFTPBP07988 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.28■□□□□ 0.84
SFTPBP07988 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.28■□□□□ 0.84
SFTPBP07988 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SFTPBP07988 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SFTPBP07988 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.28■□□□□ 0.84
SFTPBP07988 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SFTPBP07988 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SFTPBP07988 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.27■□□□□ 0.84
SFTPBP07988 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
SFTPBP07988 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SFTPBP07988 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SFTPBP07988 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SFTPBP07988 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SFTPBP07988 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SFTPBP07988 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SFTPBP07988 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SFTPBP07988 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SFTPBP07988 AC007029.1-201ENST00000604183 313 ntBASIC20.27■□□□□ 0.84
SFTPBP07988 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SFTPBP07988 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SFTPBP07988 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SFTPBP07988 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SFTPBP07988 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SFTPBP07988 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SFTPBP07988 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SFTPBP07988 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SFTPBP07988 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SFTPBP07988 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SFTPBP07988 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SFTPBP07988 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SFTPBP07988 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.25■□□□□ 0.83
SFTPBP07988 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SFTPBP07988 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SFTPBP07988 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SFTPBP07988 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.25■□□□□ 0.83
SFTPBP07988 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.25■□□□□ 0.83
SFTPBP07988 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SFTPBP07988 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SFTPBP07988 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SFTPBP07988 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SFTPBP07988 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SFTPBP07988 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SFTPBP07988 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SFTPBP07988 SLC6A10P-202ENST00000431994 2058 ntBASIC20.24■□□□□ 0.83
SFTPBP07988 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SFTPBP07988 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SFTPBP07988 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
SFTPBP07988 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.24■□□□□ 0.83
SFTPBP07988 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SFTPBP07988 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SFTPBP07988 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SFTPBP07988 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SFTPBP07988 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.23■□□□□ 0.83
SFTPBP07988 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SFTPBP07988 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SFTPBP07988 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SFTPBP07988 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SFTPBP07988 AL139125.2-201ENST00000623134 1869 ntBASIC20.22■□□□□ 0.83
SFTPBP07988 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SFTPBP07988 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SFTPBP07988 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SFTPBP07988 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SFTPBP07988 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.21■□□□□ 0.83
SFTPBP07988 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SFTPBP07988 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SFTPBP07988 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SFTPBP07988 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.21■□□□□ 0.83
SFTPBP07988 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.21■□□□□ 0.83
SFTPBP07988 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SFTPBP07988 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SFTPBP07988 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.21■□□□□ 0.83
SFTPBP07988 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SFTPBP07988 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.21■□□□□ 0.83
SFTPBP07988 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SFTPBP07988 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.2■□□□□ 0.82
SFTPBP07988 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SFTPBP07988 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SFTPBP07988 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SFTPBP07988 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SFTPBP07988 KRT18P60-201ENST00000312876 1297 ntBASIC20.2■□□□□ 0.82
SFTPBP07988 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.2■□□□□ 0.82
SFTPBP07988 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SFTPBP07988 AC012354.3-201ENST00000623734 483 ntBASIC20.2■□□□□ 0.82
SFTPBP07988 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SFTPBP07988 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SFTPBP07988 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SFTPBP07988 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SFTPBP07988 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.2■□□□□ 0.82
SFTPBP07988 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.19■□□□□ 0.82
SFTPBP07988 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SFTPBP07988 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SFTPBP07988 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SFTPBP07988 RP9P-202ENST00000450133 1212 ntBASIC20.19■□□□□ 0.82
SFTPBP07988 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SFTPBP07988 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SFTPBP07988 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SFTPBP07988 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SFTPBP07988 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SFTPBP07988 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms