Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
PCDHA13Q9Y5I0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHA13Q9Y5I0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.37■■□□□ 1.65
PCDHA13Q9Y5I0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.37■■□□□ 1.65
PCDHA13Q9Y5I0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.37■■□□□ 1.65
PCDHA13Q9Y5I0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHA13Q9Y5I0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHA13Q9Y5I0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHA13Q9Y5I0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHA13Q9Y5I0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHA13Q9Y5I0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.36■■□□□ 1.65
PCDHA13Q9Y5I0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
PCDHA13Q9Y5I0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.35■■□□□ 1.65
PCDHA13Q9Y5I0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.35■■□□□ 1.65
PCDHA13Q9Y5I0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
PCDHA13Q9Y5I0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHA13Q9Y5I0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHA13Q9Y5I0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.35■■□□□ 1.65
PCDHA13Q9Y5I0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.35■■□□□ 1.65
PCDHA13Q9Y5I0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.35■■□□□ 1.65
PCDHA13Q9Y5I0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHA13Q9Y5I0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHA13Q9Y5I0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHA13Q9Y5I0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHA13Q9Y5I0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHA13Q9Y5I0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHA13Q9Y5I0 ABHD17AP4-201ENST00000411545 909 ntBASIC25.34■■□□□ 1.65
PCDHA13Q9Y5I0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.34■■□□□ 1.65
PCDHA13Q9Y5I0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
PCDHA13Q9Y5I0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHA13Q9Y5I0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHA13Q9Y5I0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
PCDHA13Q9Y5I0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHA13Q9Y5I0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
PCDHA13Q9Y5I0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHA13Q9Y5I0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHA13Q9Y5I0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHA13Q9Y5I0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHA13Q9Y5I0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDHA13Q9Y5I0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHA13Q9Y5I0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
PCDHA13Q9Y5I0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDHA13Q9Y5I0 AL157400.5-201ENST00000507624 621 ntBASIC25.32■■□□□ 1.64
PCDHA13Q9Y5I0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.32■■□□□ 1.64
PCDHA13Q9Y5I0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
PCDHA13Q9Y5I0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHA13Q9Y5I0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHA13Q9Y5I0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.31■■□□□ 1.64
PCDHA13Q9Y5I0 AC025884.2-201ENST00000553429 711 ntBASIC25.31■■□□□ 1.64
PCDHA13Q9Y5I0 AC016575.1-201ENST00000607026 382 ntBASIC25.31■■□□□ 1.64
PCDHA13Q9Y5I0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHA13Q9Y5I0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA13Q9Y5I0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.3■■□□□ 1.64
PCDHA13Q9Y5I0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.3■■□□□ 1.64
PCDHA13Q9Y5I0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA13Q9Y5I0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA13Q9Y5I0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA13Q9Y5I0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.3■■□□□ 1.64
PCDHA13Q9Y5I0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.29■■□□□ 1.64
PCDHA13Q9Y5I0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHA13Q9Y5I0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHA13Q9Y5I0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHA13Q9Y5I0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.29■■□□□ 1.64
PCDHA13Q9Y5I0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.29■■□□□ 1.64
PCDHA13Q9Y5I0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHA13Q9Y5I0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHA13Q9Y5I0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHA13Q9Y5I0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA13Q9Y5I0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
PCDHA13Q9Y5I0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA13Q9Y5I0 AC141586.4-201ENST00000624558 1573 ntBASIC25.28■■□□□ 1.64
PCDHA13Q9Y5I0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
PCDHA13Q9Y5I0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA13Q9Y5I0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA13Q9Y5I0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDHA13Q9Y5I0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
PCDHA13Q9Y5I0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDHA13Q9Y5I0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA13Q9Y5I0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.27■■□□□ 1.64
PCDHA13Q9Y5I0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA13Q9Y5I0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.27■■□□□ 1.64
PCDHA13Q9Y5I0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA13Q9Y5I0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.27■■□□□ 1.64
PCDHA13Q9Y5I0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA13Q9Y5I0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA13Q9Y5I0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA13Q9Y5I0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA13Q9Y5I0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.26■■□□□ 1.63
PCDHA13Q9Y5I0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.26■■□□□ 1.63
PCDHA13Q9Y5I0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
PCDHA13Q9Y5I0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA13Q9Y5I0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA13Q9Y5I0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.26■■□□□ 1.63
PCDHA13Q9Y5I0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA13Q9Y5I0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA13Q9Y5I0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA13Q9Y5I0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA13Q9Y5I0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.25■■□□□ 1.63
PCDHA13Q9Y5I0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHA13Q9Y5I0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms