Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.35■□□□□ 0.85
MRPS28Q9Y2Q9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MRPS28Q9Y2Q9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.35■□□□□ 0.85
MRPS28Q9Y2Q9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRPS28Q9Y2Q9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRPS28Q9Y2Q9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MRPS28Q9Y2Q9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPS28Q9Y2Q9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPS28Q9Y2Q9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPS28Q9Y2Q9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.34■□□□□ 0.85
MRPS28Q9Y2Q9 ABHD17AP4-201ENST00000411545 909 ntBASIC20.34■□□□□ 0.85
MRPS28Q9Y2Q9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
MRPS28Q9Y2Q9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.33■□□□□ 0.85
MRPS28Q9Y2Q9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
MRPS28Q9Y2Q9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MRPS28Q9Y2Q9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.33■□□□□ 0.84
MRPS28Q9Y2Q9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MRPS28Q9Y2Q9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MRPS28Q9Y2Q9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MRPS28Q9Y2Q9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MRPS28Q9Y2Q9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MRPS28Q9Y2Q9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MRPS28Q9Y2Q9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MRPS28Q9Y2Q9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MRPS28Q9Y2Q9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPS28Q9Y2Q9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.32■□□□□ 0.84
MRPS28Q9Y2Q9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPS28Q9Y2Q9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPS28Q9Y2Q9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPS28Q9Y2Q9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPS28Q9Y2Q9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPS28Q9Y2Q9 AC016575.1-201ENST00000607026 382 ntBASIC20.32■□□□□ 0.84
MRPS28Q9Y2Q9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.32■□□□□ 0.84
MRPS28Q9Y2Q9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPS28Q9Y2Q9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPS28Q9Y2Q9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
MRPS28Q9Y2Q9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MRPS28Q9Y2Q9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MRPS28Q9Y2Q9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPS28Q9Y2Q9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
MRPS28Q9Y2Q9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MRPS28Q9Y2Q9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPS28Q9Y2Q9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.31■□□□□ 0.84
MRPS28Q9Y2Q9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MRPS28Q9Y2Q9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MRPS28Q9Y2Q9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.31■□□□□ 0.84
MRPS28Q9Y2Q9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
MRPS28Q9Y2Q9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MRPS28Q9Y2Q9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.31■□□□□ 0.84
MRPS28Q9Y2Q9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MRPS28Q9Y2Q9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
MRPS28Q9Y2Q9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
MRPS28Q9Y2Q9 AL157400.5-201ENST00000507624 621 ntBASIC20.3■□□□□ 0.84
MRPS28Q9Y2Q9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MRPS28Q9Y2Q9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPS28Q9Y2Q9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPS28Q9Y2Q9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPS28Q9Y2Q9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MRPS28Q9Y2Q9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
MRPS28Q9Y2Q9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MRPS28Q9Y2Q9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.29■□□□□ 0.84
MRPS28Q9Y2Q9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.29■□□□□ 0.84
MRPS28Q9Y2Q9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPS28Q9Y2Q9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPS28Q9Y2Q9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MRPS28Q9Y2Q9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.29■□□□□ 0.84
MRPS28Q9Y2Q9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 LINC00543-201ENST00000567234 1845 ntBASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 AC025884.2-201ENST00000553429 711 ntBASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 MIR3960-201ENST00000583311 91 ntBASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
MRPS28Q9Y2Q9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MRPS28Q9Y2Q9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.27■□□□□ 0.84
MRPS28Q9Y2Q9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
MRPS28Q9Y2Q9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
MRPS28Q9Y2Q9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.27■□□□□ 0.83
MRPS28Q9Y2Q9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MRPS28Q9Y2Q9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MRPS28Q9Y2Q9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPS28Q9Y2Q9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPS28Q9Y2Q9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MRPS28Q9Y2Q9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPS28Q9Y2Q9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPS28Q9Y2Q9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MRPS28Q9Y2Q9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms