Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CYSTM1Q9H1C7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CYSTM1Q9H1C7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.08□□□□□ -0.16
CYSTM1Q9H1C7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CYSTM1Q9H1C7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.07□□□□□ -0.16
CYSTM1Q9H1C7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC14.07□□□□□ -0.16
CYSTM1Q9H1C7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CYSTM1Q9H1C7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.07□□□□□ -0.16
CYSTM1Q9H1C7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
CYSTM1Q9H1C7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CYSTM1Q9H1C7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CYSTM1Q9H1C7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC14.07□□□□□ -0.16
CYSTM1Q9H1C7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CYSTM1Q9H1C7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CYSTM1Q9H1C7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CYSTM1Q9H1C7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CYSTM1Q9H1C7 FOXO3B-201ENST00000395675 1928 ntBASIC14.05□□□□□ -0.16
CYSTM1Q9H1C7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CYSTM1Q9H1C7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CYSTM1Q9H1C7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
CYSTM1Q9H1C7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.05□□□□□ -0.16
CYSTM1Q9H1C7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CYSTM1Q9H1C7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.05□□□□□ -0.16
CYSTM1Q9H1C7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CYSTM1Q9H1C7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CYSTM1Q9H1C7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CYSTM1Q9H1C7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CYSTM1Q9H1C7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CYSTM1Q9H1C7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CYSTM1Q9H1C7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CYSTM1Q9H1C7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC14.04□□□□□ -0.16
CYSTM1Q9H1C7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CYSTM1Q9H1C7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CYSTM1Q9H1C7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CYSTM1Q9H1C7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CYSTM1Q9H1C7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CYSTM1Q9H1C7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CYSTM1Q9H1C7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CYSTM1Q9H1C7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC14.03□□□□□ -0.16
CYSTM1Q9H1C7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC14.03□□□□□ -0.16
CYSTM1Q9H1C7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CYSTM1Q9H1C7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CYSTM1Q9H1C7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CYSTM1Q9H1C7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CYSTM1Q9H1C7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
CYSTM1Q9H1C7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CYSTM1Q9H1C7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CYSTM1Q9H1C7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CYSTM1Q9H1C7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CYSTM1Q9H1C7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CYSTM1Q9H1C7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CYSTM1Q9H1C7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CYSTM1Q9H1C7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CYSTM1Q9H1C7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC14.01□□□□□ -0.17
CYSTM1Q9H1C7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CYSTM1Q9H1C7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CYSTM1Q9H1C7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CYSTM1Q9H1C7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CYSTM1Q9H1C7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.01□□□□□ -0.17
CYSTM1Q9H1C7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CYSTM1Q9H1C7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC14.01□□□□□ -0.17
CYSTM1Q9H1C7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CYSTM1Q9H1C7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CYSTM1Q9H1C7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CYSTM1Q9H1C7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CYSTM1Q9H1C7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CYSTM1Q9H1C7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CYSTM1Q9H1C7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14□□□□□ -0.17
CYSTM1Q9H1C7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14□□□□□ -0.17
CYSTM1Q9H1C7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CYSTM1Q9H1C7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CYSTM1Q9H1C7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
CYSTM1Q9H1C7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CYSTM1Q9H1C7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CYSTM1Q9H1C7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CYSTM1Q9H1C7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14□□□□□ -0.17
CYSTM1Q9H1C7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CYSTM1Q9H1C7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CYSTM1Q9H1C7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CYSTM1Q9H1C7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CYSTM1Q9H1C7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CYSTM1Q9H1C7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms