Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
ECHDC3Q96DC8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ECHDC3Q96DC8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
ECHDC3Q96DC8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ECHDC3Q96DC8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ECHDC3Q96DC8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
ECHDC3Q96DC8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.9■■□□□ 1.42
ECHDC3Q96DC8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
ECHDC3Q96DC8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ECHDC3Q96DC8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
ECHDC3Q96DC8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ECHDC3Q96DC8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
ECHDC3Q96DC8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
ECHDC3Q96DC8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
ECHDC3Q96DC8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.89■■□□□ 1.41
ECHDC3Q96DC8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.89■■□□□ 1.41
ECHDC3Q96DC8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ECHDC3Q96DC8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
ECHDC3Q96DC8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ECHDC3Q96DC8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.88■■□□□ 1.41
ECHDC3Q96DC8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ECHDC3Q96DC8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
ECHDC3Q96DC8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ECHDC3Q96DC8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.88■■□□□ 1.41
ECHDC3Q96DC8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ECHDC3Q96DC8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ECHDC3Q96DC8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ECHDC3Q96DC8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.87■■□□□ 1.41
ECHDC3Q96DC8 KRT8P33-201ENST00000508125 1423 ntBASIC23.87■■□□□ 1.41
ECHDC3Q96DC8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ECHDC3Q96DC8 AC022616.5-201ENST00000518796 181 ntBASIC23.87■■□□□ 1.41
ECHDC3Q96DC8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ECHDC3Q96DC8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.87■■□□□ 1.41
ECHDC3Q96DC8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.87■■□□□ 1.41
ECHDC3Q96DC8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.87■■□□□ 1.41
ECHDC3Q96DC8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
ECHDC3Q96DC8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ECHDC3Q96DC8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ECHDC3Q96DC8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
ECHDC3Q96DC8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ECHDC3Q96DC8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.86■■□□□ 1.41
ECHDC3Q96DC8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
ECHDC3Q96DC8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ECHDC3Q96DC8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.85■■□□□ 1.41
ECHDC3Q96DC8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ECHDC3Q96DC8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
ECHDC3Q96DC8 YBX1P4-201ENST00000392794 808 ntBASIC23.85■■□□□ 1.41
ECHDC3Q96DC8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ECHDC3Q96DC8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
ECHDC3Q96DC8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ECHDC3Q96DC8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
ECHDC3Q96DC8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.84■■□□□ 1.41
ECHDC3Q96DC8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ECHDC3Q96DC8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
ECHDC3Q96DC8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.84■■□□□ 1.41
ECHDC3Q96DC8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
ECHDC3Q96DC8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ECHDC3Q96DC8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ECHDC3Q96DC8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ECHDC3Q96DC8 AL592295.1-201ENST00000400984 884 ntBASIC23.83■■□□□ 1.41
ECHDC3Q96DC8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.83■■□□□ 1.41
ECHDC3Q96DC8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ECHDC3Q96DC8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.83■■□□□ 1.41
ECHDC3Q96DC8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ECHDC3Q96DC8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ECHDC3Q96DC8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.82■■□□□ 1.4
ECHDC3Q96DC8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC3Q96DC8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC3Q96DC8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.82■■□□□ 1.4
ECHDC3Q96DC8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.82■■□□□ 1.4
ECHDC3Q96DC8 FOXO3B-201ENST00000395675 1928 ntBASIC23.82■■□□□ 1.4
ECHDC3Q96DC8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.81■■□□□ 1.4
ECHDC3Q96DC8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC3Q96DC8 AC103724.3-201ENST00000564481 992 ntBASIC23.81■■□□□ 1.4
ECHDC3Q96DC8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.81■■□□□ 1.4
ECHDC3Q96DC8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC3Q96DC8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.81■■□□□ 1.4
ECHDC3Q96DC8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC3Q96DC8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC3Q96DC8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC3Q96DC8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC3Q96DC8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
ECHDC3Q96DC8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ECHDC3Q96DC8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ECHDC3Q96DC8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ECHDC3Q96DC8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ECHDC3Q96DC8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ECHDC3Q96DC8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ECHDC3Q96DC8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ECHDC3Q96DC8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
ECHDC3Q96DC8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.78■■□□□ 1.4
ECHDC3Q96DC8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.78■■□□□ 1.4
ECHDC3Q96DC8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
ECHDC3Q96DC8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ECHDC3Q96DC8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ECHDC3Q96DC8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.78■■□□□ 1.4
ECHDC3Q96DC8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.78■■□□□ 1.4
ECHDC3Q96DC8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
ECHDC3Q96DC8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
ECHDC3Q96DC8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms