Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 AL451085.2-201ENST00000605085 799 ntBASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 DUSP8P4-201ENST00000399538 1761 ntBASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSMEM1Q8WWF3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SSMEM1Q8WWF3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSMEM1Q8WWF3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSMEM1Q8WWF3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 KRT18P10-201ENST00000388836 1287 ntBASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 MIR4508-201ENST00000584178 70 ntBASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSMEM1Q8WWF3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.47■□□□□ 0.71
SSMEM1Q8WWF3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSMEM1Q8WWF3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SSMEM1Q8WWF3 AC019171.1-201ENST00000601251 1056 ntBASIC19.47■□□□□ 0.71
SSMEM1Q8WWF3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSMEM1Q8WWF3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 AC103834.1-201ENST00000520383 144 ntBASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 AC087393.1-201ENST00000582896 145 ntBASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 PVT1_1.1-201ENST00000615125 194 ntBASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSMEM1Q8WWF3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.45■□□□□ 0.7
SSMEM1Q8WWF3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSMEM1Q8WWF3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSMEM1Q8WWF3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSMEM1Q8WWF3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSMEM1Q8WWF3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSMEM1Q8WWF3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SSMEM1Q8WWF3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSMEM1Q8WWF3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSMEM1Q8WWF3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
SSMEM1Q8WWF3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSMEM1Q8WWF3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSMEM1Q8WWF3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSMEM1Q8WWF3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.43■□□□□ 0.7
SSMEM1Q8WWF3 RPS2P7-201ENST00000447334 885 ntBASIC19.43■□□□□ 0.7
SSMEM1Q8WWF3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSMEM1Q8WWF3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSMEM1Q8WWF3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 AC009299.2-201ENST00000482477 511 ntBASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSMEM1Q8WWF3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSMEM1Q8WWF3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSMEM1Q8WWF3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSMEM1Q8WWF3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSMEM1Q8WWF3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSMEM1Q8WWF3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.41■□□□□ 0.7
SSMEM1Q8WWF3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SSMEM1Q8WWF3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms