Protein–RNA interactions for Protein: Q8N0V3

RBFA, Putative ribosome-binding factor A, mitochondrial, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFAQ8N0V3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RBFAQ8N0V3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RBFAQ8N0V3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RBFAQ8N0V3 AC087393.1-201ENST00000582896 145 ntBASIC23.81■■□□□ 1.4
RBFAQ8N0V3 MIR4508-201ENST00000584178 70 ntBASIC23.81■■□□□ 1.4
RBFAQ8N0V3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RBFAQ8N0V3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
RBFAQ8N0V3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RBFAQ8N0V3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RBFAQ8N0V3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RBFAQ8N0V3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RBFAQ8N0V3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RBFAQ8N0V3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
RBFAQ8N0V3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RBFAQ8N0V3 RPS2P7-201ENST00000447334 885 ntBASIC23.79■■□□□ 1.4
RBFAQ8N0V3 AC009299.2-201ENST00000482477 511 ntBASIC23.79■■□□□ 1.4
RBFAQ8N0V3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.79■■□□□ 1.4
RBFAQ8N0V3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RBFAQ8N0V3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RBFAQ8N0V3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.79■■□□□ 1.4
RBFAQ8N0V3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
RBFAQ8N0V3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RBFAQ8N0V3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RBFAQ8N0V3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
RBFAQ8N0V3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RBFAQ8N0V3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.78■■□□□ 1.4
RBFAQ8N0V3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.78■■□□□ 1.4
RBFAQ8N0V3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.78■■□□□ 1.4
RBFAQ8N0V3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.78■■□□□ 1.4
RBFAQ8N0V3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
RBFAQ8N0V3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RBFAQ8N0V3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.78■■□□□ 1.4
RBFAQ8N0V3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RBFAQ8N0V3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RBFAQ8N0V3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RBFAQ8N0V3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.77■■□□□ 1.4
RBFAQ8N0V3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RBFAQ8N0V3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RBFAQ8N0V3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.76■■□□□ 1.39
RBFAQ8N0V3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RBFAQ8N0V3 AC103724.3-201ENST00000564481 992 ntBASIC23.76■■□□□ 1.39
RBFAQ8N0V3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.76■■□□□ 1.39
RBFAQ8N0V3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RBFAQ8N0V3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RBFAQ8N0V3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RBFAQ8N0V3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RBFAQ8N0V3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RBFAQ8N0V3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
RBFAQ8N0V3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RBFAQ8N0V3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
RBFAQ8N0V3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RBFAQ8N0V3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
RBFAQ8N0V3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RBFAQ8N0V3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.75■■□□□ 1.39
RBFAQ8N0V3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RBFAQ8N0V3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RBFAQ8N0V3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.74■■□□□ 1.39
RBFAQ8N0V3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RBFAQ8N0V3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RBFAQ8N0V3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RBFAQ8N0V3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RBFAQ8N0V3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RBFAQ8N0V3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RBFAQ8N0V3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RBFAQ8N0V3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
RBFAQ8N0V3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RBFAQ8N0V3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RBFAQ8N0V3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RBFAQ8N0V3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
RBFAQ8N0V3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.72■■□□□ 1.39
RBFAQ8N0V3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RBFAQ8N0V3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RBFAQ8N0V3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RBFAQ8N0V3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RBFAQ8N0V3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RBFAQ8N0V3 LONRF2P2-201ENST00000439212 571 ntBASIC23.71■■□□□ 1.39
RBFAQ8N0V3 AC019171.1-201ENST00000601251 1056 ntBASIC23.71■■□□□ 1.39
RBFAQ8N0V3 AL031848.2-201ENST00000607670 837 ntBASIC23.71■■□□□ 1.39
RBFAQ8N0V3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.71■■□□□ 1.39
RBFAQ8N0V3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
RBFAQ8N0V3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RBFAQ8N0V3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RBFAQ8N0V3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RBFAQ8N0V3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
RBFAQ8N0V3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RBFAQ8N0V3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RBFAQ8N0V3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
RBFAQ8N0V3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RBFAQ8N0V3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RBFAQ8N0V3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.7■■□□□ 1.38
RBFAQ8N0V3 AC097639.1-201ENST00000565519 1891 ntBASIC23.7■■□□□ 1.38
RBFAQ8N0V3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.7■■□□□ 1.38
RBFAQ8N0V3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RBFAQ8N0V3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RBFAQ8N0V3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
RBFAQ8N0V3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.69■■□□□ 1.38
RBFAQ8N0V3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RBFAQ8N0V3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
RBFAQ8N0V3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
RBFAQ8N0V3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms