Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.58■■□□□ 1.04
CDC42P60953 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
CDC42P60953 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.58■■□□□ 1.04
CDC42P60953 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42P60953 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42P60953 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42P60953 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42P60953 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42P60953 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42P60953 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42P60953 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42P60953 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42P60953 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.57■■□□□ 1.04
CDC42P60953 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42P60953 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42P60953 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42P60953 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42P60953 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.56■■□□□ 1.04
CDC42P60953 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42P60953 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42P60953 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.56■■□□□ 1.04
CDC42P60953 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42P60953 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42P60953 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42P60953 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42P60953 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42P60953 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CDC42P60953 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.55■■□□□ 1.04
CDC42P60953 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42P60953 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42P60953 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42P60953 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42P60953 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42P60953 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CDC42P60953 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.54■■□□□ 1.04
CDC42P60953 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.54■■□□□ 1.04
CDC42P60953 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42P60953 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.54■■□□□ 1.04
CDC42P60953 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42P60953 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42P60953 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42P60953 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CDC42P60953 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
CDC42P60953 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42P60953 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42P60953 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42P60953 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.53■■□□□ 1.04
CDC42P60953 LINC01971-201ENST00000617888 1048 ntBASIC21.53■■□□□ 1.04
CDC42P60953 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.53■■□□□ 1.04
CDC42P60953 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42P60953 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CDC42P60953 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.53■■□□□ 1.04
CDC42P60953 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42P60953 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42P60953 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42P60953 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CDC42P60953 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42P60953 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42P60953 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42P60953 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.52■■□□□ 1.04
CDC42P60953 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42P60953 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42P60953 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42P60953 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42P60953 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42P60953 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.52■■□□□ 1.04
CDC42P60953 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.52■■□□□ 1.03
CDC42P60953 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDC42P60953 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDC42P60953 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42P60953 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42P60953 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42P60953 DUSP8P5-201ENST00000422884 1815 ntBASIC21.51■■□□□ 1.03
CDC42P60953 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.51■■□□□ 1.03
CDC42P60953 DUX4L13-201ENST00000554103 1267 ntBASIC21.51■■□□□ 1.03
CDC42P60953 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.51■■□□□ 1.03
CDC42P60953 DUX4L15-201ENST00000611059 1267 ntBASIC21.51■■□□□ 1.03
CDC42P60953 DUX4L23-201ENST00000615195 1269 ntBASIC21.51■■□□□ 1.03
CDC42P60953 DUX4L24-201ENST00000617576 1269 ntBASIC21.51■■□□□ 1.03
CDC42P60953 DUX4L22-201ENST00000618238 1269 ntBASIC21.51■■□□□ 1.03
CDC42P60953 DUX4L20-201ENST00000619712 1269 ntBASIC21.51■■□□□ 1.03
CDC42P60953 DUX4L21-201ENST00000622058 1269 ntBASIC21.51■■□□□ 1.03
CDC42P60953 DUX4L10-201ENST00000622460 1267 ntBASIC21.51■■□□□ 1.03
CDC42P60953 DUX4L25-201ENST00000624915 1269 ntBASIC21.51■■□□□ 1.03
CDC42P60953 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42P60953 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42P60953 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.51■■□□□ 1.03
CDC42P60953 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42P60953 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.51■■□□□ 1.03
CDC42P60953 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.5■■□□□ 1.03
CDC42P60953 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CDC42P60953 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CDC42P60953 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.5■■□□□ 1.03
CDC42P60953 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CDC42P60953 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CDC42P60953 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CDC42P60953 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.5■■□□□ 1.03
CDC42P60953 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CDC42P60953 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.5■■□□□ 1.03
CDC42P60953 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms