Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 DUX4L13-201ENST00000554103 1267 ntBASIC18■□□□□ 0.47
TCRAP04437 DUX4L15-201ENST00000611059 1267 ntBASIC18■□□□□ 0.47
TCRAP04437 DUX4L23-201ENST00000615195 1269 ntBASIC18■□□□□ 0.47
TCRAP04437 DUX4L24-201ENST00000617576 1269 ntBASIC18■□□□□ 0.47
TCRAP04437 DUX4L22-201ENST00000618238 1269 ntBASIC18■□□□□ 0.47
TCRAP04437 DUX4L20-201ENST00000619712 1269 ntBASIC18■□□□□ 0.47
TCRAP04437 DUX4L21-201ENST00000622058 1269 ntBASIC18■□□□□ 0.47
TCRAP04437 DUX4L10-201ENST00000622460 1267 ntBASIC18■□□□□ 0.47
TCRAP04437 DUX4L25-201ENST00000624915 1269 ntBASIC18■□□□□ 0.47
TCRAP04437 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TCRAP04437 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TCRAP04437 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRAP04437 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18■□□□□ 0.47
TCRAP04437 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRAP04437 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRAP04437 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRAP04437 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.99■□□□□ 0.47
TCRAP04437 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRAP04437 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRAP04437 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRAP04437 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRAP04437 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRAP04437 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRAP04437 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRAP04437 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TCRAP04437 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRAP04437 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRAP04437 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRAP04437 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.99■□□□□ 0.47
TCRAP04437 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TCRAP04437 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRAP04437 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRAP04437 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRAP04437 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRAP04437 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.98■□□□□ 0.47
TCRAP04437 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TCRAP04437 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCRAP04437 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TCRAP04437 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TCRAP04437 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRAP04437 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TCRAP04437 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.97■□□□□ 0.47
TCRAP04437 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TCRAP04437 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCRAP04437 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.97■□□□□ 0.47
TCRAP04437 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRAP04437 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.97■□□□□ 0.47
TCRAP04437 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCRAP04437 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRAP04437 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCRAP04437 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRAP04437 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRAP04437 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRAP04437 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TCRAP04437 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.96■□□□□ 0.47
TCRAP04437 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TCRAP04437 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRAP04437 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.96■□□□□ 0.47
TCRAP04437 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRAP04437 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRAP04437 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRAP04437 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRAP04437 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRAP04437 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCRAP04437 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TCRAP04437 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRAP04437 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TCRAP04437 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.95■□□□□ 0.46
TCRAP04437 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TCRAP04437 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TCRAP04437 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRAP04437 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
TCRAP04437 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.95■□□□□ 0.46
TCRAP04437 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRAP04437 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRAP04437 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRAP04437 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRAP04437 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRAP04437 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRAP04437 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.94■□□□□ 0.46
TCRAP04437 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRAP04437 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRAP04437 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.94■□□□□ 0.46
TCRAP04437 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRAP04437 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.94■□□□□ 0.46
TCRAP04437 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.93■□□□□ 0.46
TCRAP04437 DUSP8P5-201ENST00000422884 1815 ntBASIC17.93■□□□□ 0.46
TCRAP04437 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TCRAP04437 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TCRAP04437 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRAP04437 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRAP04437 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRAP04437 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRAP04437 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRAP04437 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TCRAP04437 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TCRAP04437 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRAP04437 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.92■□□□□ 0.46
TCRAP04437 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TCRAP04437 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms