Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
SNRNP200O75643 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.88■■□□□ 1.25
SNRNP200O75643 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SNRNP200O75643 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SNRNP200O75643 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SNRNP200O75643 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.88■■□□□ 1.25
SNRNP200O75643 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SNRNP200O75643 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SNRNP200O75643 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
SNRNP200O75643 KRT8P33-201ENST00000508125 1423 ntBASIC22.87■■□□□ 1.25
SNRNP200O75643 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SNRNP200O75643 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SNRNP200O75643 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.87■■□□□ 1.25
SNRNP200O75643 AC018755.3-202ENST00000596210 929 ntBASIC22.87■■□□□ 1.25
SNRNP200O75643 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SNRNP200O75643 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SNRNP200O75643 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SNRNP200O75643 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.86■■□□□ 1.25
SNRNP200O75643 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
SNRNP200O75643 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SNRNP200O75643 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SNRNP200O75643 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.85■■□□□ 1.25
SNRNP200O75643 AC009299.2-201ENST00000482477 511 ntBASIC22.85■■□□□ 1.25
SNRNP200O75643 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SNRNP200O75643 AC074183.2-201ENST00000623112 922 ntBASIC22.85■■□□□ 1.25
SNRNP200O75643 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SNRNP200O75643 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNRNP200O75643 AC022616.5-201ENST00000518796 181 ntBASIC22.84■■□□□ 1.25
SNRNP200O75643 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.84■■□□□ 1.25
SNRNP200O75643 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNRNP200O75643 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNRNP200O75643 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNRNP200O75643 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.84■■□□□ 1.25
SNRNP200O75643 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.84■■□□□ 1.25
SNRNP200O75643 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
SNRNP200O75643 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNRNP200O75643 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.84■■□□□ 1.25
SNRNP200O75643 BHLHE23-202ENST00000612929 1109 ntBASIC22.84■■□□□ 1.25
SNRNP200O75643 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SNRNP200O75643 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SNRNP200O75643 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.83■■□□□ 1.25
SNRNP200O75643 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
SNRNP200O75643 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
SNRNP200O75643 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
SNRNP200O75643 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNRNP200O75643 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.82■■□□□ 1.24
SNRNP200O75643 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNRNP200O75643 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNRNP200O75643 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
SNRNP200O75643 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.81■■□□□ 1.24
SNRNP200O75643 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SNRNP200O75643 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SNRNP200O75643 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.81■■□□□ 1.24
SNRNP200O75643 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SNRNP200O75643 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.81■■□□□ 1.24
SNRNP200O75643 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.81■■□□□ 1.24
SNRNP200O75643 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SNRNP200O75643 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.81■■□□□ 1.24
SNRNP200O75643 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SNRNP200O75643 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.81■■□□□ 1.24
SNRNP200O75643 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
SNRNP200O75643 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
SNRNP200O75643 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SNRNP200O75643 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SNRNP200O75643 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SNRNP200O75643 AC103834.1-201ENST00000520383 144 ntBASIC22.8■■□□□ 1.24
SNRNP200O75643 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SNRNP200O75643 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
SNRNP200O75643 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SNRNP200O75643 AC145676.1-201ENST00000514988 2004 ntBASIC22.8■■□□□ 1.24
SNRNP200O75643 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SNRNP200O75643 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SNRNP200O75643 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SNRNP200O75643 AC019171.1-201ENST00000601251 1056 ntBASIC22.79■■□□□ 1.24
SNRNP200O75643 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.79■■□□□ 1.24
SNRNP200O75643 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SNRNP200O75643 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SNRNP200O75643 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SNRNP200O75643 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SNRNP200O75643 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SNRNP200O75643 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SNRNP200O75643 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
SNRNP200O75643 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.78■■□□□ 1.24
SNRNP200O75643 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
SNRNP200O75643 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SNRNP200O75643 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
SNRNP200O75643 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SNRNP200O75643 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SNRNP200O75643 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SNRNP200O75643 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.77■■□□□ 1.24
SNRNP200O75643 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.77■■□□□ 1.24
SNRNP200O75643 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.77■■□□□ 1.24
SNRNP200O75643 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.77■■□□□ 1.24
SNRNP200O75643 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
SNRNP200O75643 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SNRNP200O75643 MIR4281-201ENST00000580852 62 ntBASIC22.76■■□□□ 1.23
SNRNP200O75643 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
SNRNP200O75643 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SNRNP200O75643 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SNRNP200O75643 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms