Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 LONRF2P2-201ENST00000439212 571 ntBASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 HYI-210ENST00000486909 905 ntTSL 5 BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP4-3Q9BYR4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP4-3Q9BYR4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP4-3Q9BYR4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP4-3Q9BYR4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC8.16□□□□□ -1.1
KRTAP4-3Q9BYR4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
KRTAP4-3Q9BYR4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP4-3Q9BYR4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC8.16□□□□□ -1.1
KRTAP4-3Q9BYR4 MIR4508-201ENST00000584178 70 ntBASIC8.16□□□□□ -1.1
KRTAP4-3Q9BYR4 AL031848.2-201ENST00000607670 837 ntBASIC8.16□□□□□ -1.1
KRTAP4-3Q9BYR4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP4-3Q9BYR4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP4-3Q9BYR4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC8.16□□□□□ -1.1
KRTAP4-3Q9BYR4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
KRTAP4-3Q9BYR4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
KRTAP4-3Q9BYR4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 AC074183.2-201ENST00000623112 922 ntBASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP4-3Q9BYR4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
KRTAP4-3Q9BYR4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
KRTAP4-3Q9BYR4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
KRTAP4-3Q9BYR4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
KRTAP4-3Q9BYR4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
KRTAP4-3Q9BYR4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
KRTAP4-3Q9BYR4 AC239859.2-201ENST00000444165 318 ntBASIC8.14□□□□□ -1.11
KRTAP4-3Q9BYR4 OR2A1-AS1-204ENST00000470435 602 ntBASIC8.14□□□□□ -1.11
KRTAP4-3Q9BYR4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC8.14□□□□□ -1.11
KRTAP4-3Q9BYR4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC8.14□□□□□ -1.11
KRTAP4-3Q9BYR4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
KRTAP4-3Q9BYR4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
KRTAP4-3Q9BYR4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 AC096887.2-201ENST00000623443 1957 ntBASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC8.13□□□□□ -1.11
KRTAP4-3Q9BYR4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP4-3Q9BYR4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP4-3Q9BYR4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP4-3Q9BYR4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP4-3Q9BYR4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC8.12□□□□□ -1.11
KRTAP4-3Q9BYR4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP4-3Q9BYR4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP4-3Q9BYR4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
KRTAP4-3Q9BYR4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms