Protein–RNA interactions for Protein: P40073

SHO1, High osmolarity signaling protein SHO1, yeastyeast

Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHO1P40073 KNS1YLL019C 2214 nt5.44□□□□□ -1.54
SHO1P40073 SIR2YDL042C 1689 nt5.43□□□□□ -1.54
SHO1P40073 YHR070C-AYHR070C-A 411 nt5.43□□□□□ -1.54
SHO1P40073 QNS1YHR074W 2145 nt5.43□□□□□ -1.54
SHO1P40073 DOT5YIL010W 648 nt5.43□□□□□ -1.54
SHO1P40073 YMR147WYMR147W 672 nt5.43□□□□□ -1.54
SHO1P40073 JNM1YMR294W 1122 nt5.43□□□□□ -1.54
SHO1P40073 AST1YBL069W 1290 nt5.43□□□□□ -1.54
SHO1P40073 YCK1YHR135C 1617 nt5.43□□□□□ -1.54
SHO1P40073 PHO3YBR092C 1404 nt5.42□□□□□ -1.54
SHO1P40073 BUD32YGR262C 786 nt5.42□□□□□ -1.54
SHO1P40073 YIR017W-AYIR017W-A 600 nt5.42□□□□□ -1.54
SHO1P40073 RPS5YJR123W 678 nt5.42□□□□□ -1.54
SHO1P40073 AIM33YML087C 939 nt5.42□□□□□ -1.54
SHO1P40073 MRPS16YPL013C 366 nt5.42□□□□□ -1.54
SHO1P40073 RPL21AYBR191W 483 nt5.42□□□□□ -1.54
SHO1P40073 SAC6YDR129C 1929 nt5.42□□□□□ -1.54
SHO1P40073 WHI2YOR043W 1461 nt5.41□□□□□ -1.54
SHO1P40073 YDL129WYDL129W 876 nt5.41□□□□□ -1.54
SHO1P40073 TMT1YER175C 900 nt5.41□□□□□ -1.54
SHO1P40073 BSC4YNL269W 396 nt5.41□□□□□ -1.54
SHO1P40073 YPR160C-AYPR160C-A 285 nt5.41□□□□□ -1.54
SHO1P40073 SKS1YPL026C 1509 nt5.41□□□□□ -1.54
SHO1P40073 TEL2YGR099W 2067 nt5.41□□□□□ -1.54
SHO1P40073 ISC1YER019W 1434 nt5.4□□□□□ -1.54
SHO1P40073 MDM31YHR194W 1740 nt5.4□□□□□ -1.54
SHO1P40073 GEF1YJR040W 2340 nt5.4□□□□□ -1.54
SHO1P40073 CDC34YDR054C 888 nt5.4□□□□□ -1.54
SHO1P40073 YEL068CYEL068C 333 nt5.4□□□□□ -1.54
SHO1P40073 GCV3YAL044C 513 nt5.4□□□□□ -1.54
SHO1P40073 RRS1YOR294W 612 nt5.4□□□□□ -1.54
SHO1P40073 MSS116YDR194C 1995 nt5.39□□□□□ -1.55
SHO1P40073 YDR034W-BYDR034W-B 156 nt5.39□□□□□ -1.55
SHO1P40073 YDR278CYDR278C 318 nt5.39□□□□□ -1.55
SHO1P40073 DUS4YLR405W 1104 nt5.39□□□□□ -1.55
SHO1P40073 TSA1YML028W 591 nt5.39□□□□□ -1.55
SHO1P40073 MSS1YMR023C 1581 nt5.38□□□□□ -1.55
SHO1P40073 YPL071CYPL071C 471 nt5.38□□□□□ -1.55
SHO1P40073 LSG1YGL099W 1923 nt5.38□□□□□ -1.55
SHO1P40073 APM1YPL259C 1428 nt5.38□□□□□ -1.55
SHO1P40073 HRQ1YDR291W 3234 nt5.37□□□□□ -1.55
SHO1P40073 VPS61YDR136C 573 nt5.37□□□□□ -1.55
SHO1P40073 LEU5YHR002W 1074 nt5.37□□□□□ -1.55
SHO1P40073 YHR140WYHR140W 720 nt5.37□□□□□ -1.55
SHO1P40073 BCY1YIL033C 1251 nt5.37□□□□□ -1.55
SHO1P40073 COA1YIL157C 594 nt5.37□□□□□ -1.55
SHO1P40073 UIP4YPL186C 915 nt5.37□□□□□ -1.55
SHO1P40073 YTP1YNL237W 1380 nt5.37□□□□□ -1.55
SHO1P40073 ATG7YHR171W 1893 nt5.37□□□□□ -1.55
SHO1P40073 SIT4YDL047W 936 nt5.36□□□□□ -1.55
SHO1P40073 MRPL1YDR116C 858 nt5.36□□□□□ -1.55
SHO1P40073 RDL2YOR286W 450 nt5.36□□□□□ -1.55
SHO1P40073 ENV7YPL236C 1095 nt5.36□□□□□ -1.55
SHO1P40073 SUB2YDL084W 1341 nt5.36□□□□□ -1.55
SHO1P40073 CDS1YBR029C 1374 nt5.36□□□□□ -1.55
SHO1P40073 VPS72YDR485C 2388 nt5.36□□□□□ -1.55
SHO1P40073 RGD1YBR260C 2001 nt5.35□□□□□ -1.55
SHO1P40073 BNA5YLR231C 1362 nt5.35□□□□□ -1.55
SHO1P40073 CDC10YCR002C 969 nt5.35□□□□□ -1.55
SHO1P40073 TRP1YDR007W 675 nt5.35□□□□□ -1.55
SHO1P40073 YGL235WYGL235W 537 nt5.35□□□□□ -1.55
SHO1P40073 MOD5YOR274W 1287 nt5.35□□□□□ -1.55
SHO1P40073 DAP1YPL170W 459 nt5.35□□□□□ -1.55
SHO1P40073 YPR114WYPR114W 948 nt5.35□□□□□ -1.55
SHO1P40073 RPO26YPR187W 468 nt5.35□□□□□ -1.55
SHO1P40073 BZZ1YHR114W 1902 nt5.35□□□□□ -1.55
SHO1P40073 PAP1YKR002W 1707 nt5.34□□□□□ -1.55
SHO1P40073 RSA4YCR072C 1548 nt5.34□□□□□ -1.55
SHO1P40073 GUD1YDL238C 1470 nt5.34□□□□□ -1.55
SHO1P40073 NHA1YLR138W 2958 nt5.34□□□□□ -1.55
SHO1P40073 YMR119W-AYMR119W-A 375 nt5.34□□□□□ -1.55
SHO1P40073 YNL042W-BYNL042W-B 258 nt5.34□□□□□ -1.55
SHO1P40073 CRZ1YNL027W 2037 nt5.34□□□□□ -1.55
SHO1P40073 YOL036WYOL036W 2286 nt5.34□□□□□ -1.56
SHO1P40073 PRI2YKL045W 1587 nt5.33□□□□□ -1.56
SHO1P40073 DUG1YFR044C 1446 nt5.33□□□□□ -1.56
SHO1P40073 CHL4YDR254W 1377 nt5.33□□□□□ -1.56
SHO1P40073 HST3YOR025W 1344 nt5.33□□□□□ -1.56
SHO1P40073 NCS6YGL211W 1080 nt5.33□□□□□ -1.56
SHO1P40073 tR(ACG)DtR(ACG)D 73 nt5.33□□□□□ -1.56
SHO1P40073 tR(ACG)EtR(ACG)E 73 nt5.33□□□□□ -1.56
SHO1P40073 tR(ACG)KtR(ACG)K 73 nt5.33□□□□□ -1.56
SHO1P40073 tR(ACG)LtR(ACG)L 73 nt5.33□□□□□ -1.56
SHO1P40073 tR(ACG)OtR(ACG)O 73 nt5.33□□□□□ -1.56
SHO1P40073 RMD9YGL107C 1941 nt5.33□□□□□ -1.56
SHO1P40073 UTP4YDR324C 2331 nt5.32□□□□□ -1.56
SHO1P40073 APM4YOL062C 1476 nt5.32□□□□□ -1.56
SHO1P40073 GEX1YCL073C 1848 nt5.32□□□□□ -1.56
SHO1P40073 GEX2YKR106W 1848 nt5.32□□□□□ -1.56
SHO1P40073 ADE12YNL220W 1302 nt5.32□□□□□ -1.56
SHO1P40073 DPB2YPR175W 2070 nt5.32□□□□□ -1.56
SHO1P40073 ERP5YHR110W 639 nt5.32□□□□□ -1.56
SHO1P40073 YIR042CYIR042C 711 nt5.32□□□□□ -1.56
SHO1P40073 SEN34YAR008W 828 nt5.32□□□□□ -1.56
SHO1P40073 TAF11YML015C 1041 nt5.32□□□□□ -1.56
SHO1P40073 CWC25YNL245C 540 nt5.32□□□□□ -1.56
SHO1P40073 YBR124WYBR124W 360 nt5.32□□□□□ -1.56
SHO1P40073 RAD24YER173W 1980 nt5.32□□□□□ -1.56
SHO1P40073 ARO10YDR380W 1908 nt5.32□□□□□ -1.56
SHO1P40073 FAT3YKL187C 2253 nt5.32□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 16.1 ms