Protein–RNA interactions for Protein: P05388

RPLP0, 60S acidic ribosomal protein P0, humanhuman

Known RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0P05388 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.35■■□□□ 1.33
RPLP0P05388 AC131212.1-201ENST00000613771 668 ntBASIC23.35■■□□□ 1.33
RPLP0P05388 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RPLP0P05388 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.34■■□□□ 1.33
RPLP0P05388 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RPLP0P05388 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RPLP0P05388 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
RPLP0P05388 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
RPLP0P05388 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RPLP0P05388 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.34■■□□□ 1.33
RPLP0P05388 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RPLP0P05388 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
RPLP0P05388 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RPLP0P05388 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RPLP0P05388 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.33■■□□□ 1.33
RPLP0P05388 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.33■■□□□ 1.33
RPLP0P05388 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.33■■□□□ 1.33
RPLP0P05388 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
RPLP0P05388 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RPLP0P05388 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RPLP0P05388 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RPLP0P05388 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RPLP0P05388 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RPLP0P05388 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.32■■□□□ 1.32
RPLP0P05388 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RPLP0P05388 KRT18P10-201ENST00000388836 1287 ntBASIC23.32■■□□□ 1.32
RPLP0P05388 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RPLP0P05388 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RPLP0P05388 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RPLP0P05388 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RPLP0P05388 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.31■■□□□ 1.32
RPLP0P05388 THA1P-201ENST00000590384 1145 ntBASIC23.31■■□□□ 1.32
RPLP0P05388 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
RPLP0P05388 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
RPLP0P05388 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RPLP0P05388 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.31■■□□□ 1.32
RPLP0P05388 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.3■■□□□ 1.32
RPLP0P05388 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RPLP0P05388 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RPLP0P05388 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
RPLP0P05388 AC239859.2-201ENST00000444165 318 ntBASIC23.3■■□□□ 1.32
RPLP0P05388 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.3■■□□□ 1.32
RPLP0P05388 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
RPLP0P05388 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RPLP0P05388 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.29■■□□□ 1.32
RPLP0P05388 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
RPLP0P05388 AL592295.1-201ENST00000400984 884 ntBASIC23.29■■□□□ 1.32
RPLP0P05388 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RPLP0P05388 BX255925.1-201ENST00000566954 1854 ntBASIC23.29■■□□□ 1.32
RPLP0P05388 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RPLP0P05388 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RPLP0P05388 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RPLP0P05388 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RPLP0P05388 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RPLP0P05388 AC142472.1-201ENST00000612013 1741 ntBASIC23.28■■□□□ 1.32
RPLP0P05388 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RPLP0P05388 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.27■■□□□ 1.32
RPLP0P05388 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RPLP0P05388 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.27■■□□□ 1.32
RPLP0P05388 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RPLP0P05388 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.26■■□□□ 1.31
RPLP0P05388 AL356441.2-201ENST00000443009 864 ntBASIC23.26■■□□□ 1.31
RPLP0P05388 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
RPLP0P05388 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RPLP0P05388 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.25■■□□□ 1.31
RPLP0P05388 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.25■■□□□ 1.31
RPLP0P05388 Z92544.1-202ENST00000571933 1220 ntBASIC23.24■■□□□ 1.31
RPLP0P05388 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RPLP0P05388 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
RPLP0P05388 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RPLP0P05388 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RPLP0P05388 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.23■■□□□ 1.31
RPLP0P05388 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.23■■□□□ 1.31
RPLP0P05388 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RPLP0P05388 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.23■■□□□ 1.31
RPLP0P05388 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.22■■□□□ 1.31
RPLP0P05388 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RPLP0P05388 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.22■■□□□ 1.31
RPLP0P05388 AC022616.5-201ENST00000518796 181 ntBASIC23.22■■□□□ 1.31
RPLP0P05388 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.22■■□□□ 1.31
RPLP0P05388 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
RPLP0P05388 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RPLP0P05388 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RPLP0P05388 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RPLP0P05388 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
RPLP0P05388 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RPLP0P05388 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RPLP0P05388 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RPLP0P05388 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.21■■□□□ 1.31
RPLP0P05388 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RPLP0P05388 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.2■■□□□ 1.3
RPLP0P05388 AP004609.3-201ENST00000610705 1884 ntBASIC23.2■■□□□ 1.3
RPLP0P05388 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
RPLP0P05388 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.2■■□□□ 1.3
RPLP0P05388 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.2■■□□□ 1.3
RPLP0P05388 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RPLP0P05388 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.2■■□□□ 1.3
RPLP0P05388 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RPLP0P05388 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RPLP0P05388 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms