Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
H3BM21 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
H3BM21 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
H3BM21 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
H3BM21 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.79■■□□□ 1.4
H3BM21 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
H3BM21 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.79■■□□□ 1.4
H3BM21 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.78■■□□□ 1.4
H3BM21 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
H3BM21 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
H3BM21 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.78■■□□□ 1.4
H3BM21 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
H3BM21 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
H3BM21 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
H3BM21 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.78■■□□□ 1.4
H3BM21 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
H3BM21 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
H3BM21 AC103724.3-201ENST00000564481 992 ntBASIC23.77■■□□□ 1.4
H3BM21 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
H3BM21 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.77■■□□□ 1.4
H3BM21 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.77■■□□□ 1.4
H3BM21 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
H3BM21 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.76■■□□□ 1.39
H3BM21 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
H3BM21 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
H3BM21 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
H3BM21 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.76■■□□□ 1.39
H3BM21 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
H3BM21 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
H3BM21 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
H3BM21 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
H3BM21 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
H3BM21 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.74■■□□□ 1.39
H3BM21 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
H3BM21 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
H3BM21 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
H3BM21 LONRF2P2-201ENST00000439212 571 ntBASIC23.74■■□□□ 1.39
H3BM21 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
H3BM21 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
H3BM21 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
H3BM21 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
H3BM21 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
H3BM21 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.73■■□□□ 1.39
H3BM21 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
H3BM21 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
H3BM21 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.73■■□□□ 1.39
H3BM21 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
H3BM21 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
H3BM21 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.73■■□□□ 1.39
H3BM21 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
H3BM21 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
H3BM21 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
H3BM21 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.72■■□□□ 1.39
H3BM21 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
H3BM21 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
H3BM21 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
H3BM21 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
H3BM21 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
H3BM21 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
H3BM21 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
H3BM21 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.71■■□□□ 1.39
H3BM21 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
H3BM21 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.71■■□□□ 1.39
H3BM21 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
H3BM21 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.7■■□□□ 1.39
H3BM21 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
H3BM21 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.7■■□□□ 1.38
H3BM21 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.7■■□□□ 1.38
H3BM21 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.7■■□□□ 1.38
H3BM21 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.7■■□□□ 1.38
H3BM21 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
H3BM21 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
H3BM21 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
H3BM21 AC092803.2-201ENST00000564287 1899 ntBASIC23.69■■□□□ 1.38
H3BM21 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
H3BM21 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.69■■□□□ 1.38
H3BM21 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.69■■□□□ 1.38
H3BM21 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
H3BM21 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
H3BM21 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.68■■□□□ 1.38
H3BM21 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
H3BM21 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
H3BM21 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
H3BM21 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
H3BM21 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
H3BM21 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.67■■□□□ 1.38
H3BM21 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
H3BM21 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.67■■□□□ 1.38
H3BM21 AC022616.5-201ENST00000518796 181 ntBASIC23.67■■□□□ 1.38
H3BM21 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
H3BM21 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
H3BM21 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
H3BM21 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.66■■□□□ 1.38
H3BM21 GUSBP5-201ENST00000418136 578 ntBASIC23.66■■□□□ 1.38
H3BM21 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.66■■□□□ 1.38
H3BM21 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.66■■□□□ 1.38
H3BM21 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
H3BM21 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.66■■□□□ 1.38
H3BM21 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
H3BM21 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms