Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
H3BM21 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
H3BM21 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
H3BM21 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
H3BM21 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.79■■□□□ 1.4
H3BM21 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
H3BM21 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.79■■□□□ 1.4
H3BM21 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.78■■□□□ 1.4
H3BM21 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
H3BM21 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
H3BM21 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.78■■□□□ 1.4
H3BM21 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
H3BM21 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
H3BM21 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
H3BM21 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.78■■□□□ 1.4
H3BM21 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
H3BM21 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
H3BM21 AC103724.3-201ENST00000564481 992 ntBASIC23.77■■□□□ 1.4
H3BM21 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
H3BM21 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.77■■□□□ 1.4
H3BM21 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.77■■□□□ 1.4
H3BM21 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
H3BM21 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.76■■□□□ 1.39
H3BM21 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
H3BM21 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
H3BM21 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
H3BM21 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.76■■□□□ 1.39
H3BM21 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
H3BM21 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
H3BM21 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
H3BM21 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
H3BM21 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
H3BM21 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.74■■□□□ 1.39
H3BM21 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
H3BM21 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
H3BM21 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
H3BM21 LONRF2P2-201ENST00000439212 571 ntBASIC23.74■■□□□ 1.39
H3BM21 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
H3BM21 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
H3BM21 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
H3BM21 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
H3BM21 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
H3BM21 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.73■■□□□ 1.39
H3BM21 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
H3BM21 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
H3BM21 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.73■■□□□ 1.39
H3BM21 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
H3BM21 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
H3BM21 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.73■■□□□ 1.39
H3BM21 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
H3BM21 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
H3BM21 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
H3BM21 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.72■■□□□ 1.39
H3BM21 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
H3BM21 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
H3BM21 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
H3BM21 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
H3BM21 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
H3BM21 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
H3BM21 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
H3BM21 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.71■■□□□ 1.39
H3BM21 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
H3BM21 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.71■■□□□ 1.39
H3BM21 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
H3BM21 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.7■■□□□ 1.39
H3BM21 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
H3BM21 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.7■■□□□ 1.38
H3BM21 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.7■■□□□ 1.38
H3BM21 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.7■■□□□ 1.38
H3BM21 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.7■■□□□ 1.38
H3BM21 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
H3BM21 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
H3BM21 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
H3BM21 AC092803.2-201ENST00000564287 1899 ntBASIC23.69■■□□□ 1.38
H3BM21 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
H3BM21 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.69■■□□□ 1.38
H3BM21 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.69■■□□□ 1.38
H3BM21 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
H3BM21 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
H3BM21 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.68■■□□□ 1.38
H3BM21 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
H3BM21 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
H3BM21 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
H3BM21 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
H3BM21 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
H3BM21 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.67■■□□□ 1.38
H3BM21 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
H3BM21 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.67■■□□□ 1.38
H3BM21 AC022616.5-201ENST00000518796 181 ntBASIC23.67■■□□□ 1.38
H3BM21 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
H3BM21 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
H3BM21 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
H3BM21 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.66■■□□□ 1.38
H3BM21 GUSBP5-201ENST00000418136 578 ntBASIC23.66■■□□□ 1.38
H3BM21 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.66■■□□□ 1.38
H3BM21 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.66■■□□□ 1.38
H3BM21 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
H3BM21 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.66■■□□□ 1.38
H3BM21 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
H3BM21 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms