Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV22A0A0B4J277 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV22A0A0B4J277 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV22A0A0B4J277 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV22A0A0B4J277 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV22A0A0B4J277 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV22A0A0B4J277 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV22A0A0B4J277 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV22A0A0B4J277 AC010501.1-201ENST00000606270 1962 ntBASIC13.52□□□□□ -0.25
TRAV22A0A0B4J277 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
TRAV22A0A0B4J277 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV22A0A0B4J277 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRAV22A0A0B4J277 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV22A0A0B4J277 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV22A0A0B4J277 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV22A0A0B4J277 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV22A0A0B4J277 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV22A0A0B4J277 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV22A0A0B4J277 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRAV22A0A0B4J277 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TRAV22A0A0B4J277 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV22A0A0B4J277 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV22A0A0B4J277 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV22A0A0B4J277 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC13.49□□□□□ -0.25
TRAV22A0A0B4J277 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAV22A0A0B4J277 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TRAV22A0A0B4J277 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV22A0A0B4J277 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV22A0A0B4J277 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV22A0A0B4J277 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV22A0A0B4J277 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAV22A0A0B4J277 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRAV22A0A0B4J277 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV22A0A0B4J277 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV22A0A0B4J277 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV22A0A0B4J277 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV22A0A0B4J277 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRAV22A0A0B4J277 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV22A0A0B4J277 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV22A0A0B4J277 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV22A0A0B4J277 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV22A0A0B4J277 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV22A0A0B4J277 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 AL117328.2-201ENST00000624617 1940 ntBASIC13.47□□□□□ -0.25
TRAV22A0A0B4J277 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRAV22A0A0B4J277 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
TRAV22A0A0B4J277 USP48-205ENST00000421625 2818 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV22A0A0B4J277 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV22A0A0B4J277 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV22A0A0B4J277 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV22A0A0B4J277 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV22A0A0B4J277 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
TRAV22A0A0B4J277 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV22A0A0B4J277 AC142472.1-201ENST00000612013 1741 ntBASIC13.46□□□□□ -0.25
TRAV22A0A0B4J277 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV22A0A0B4J277 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV22A0A0B4J277 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV22A0A0B4J277 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC13.46□□□□□ -0.26
TRAV22A0A0B4J277 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV22A0A0B4J277 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC13.45□□□□□ -0.26
TRAV22A0A0B4J277 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRAV22A0A0B4J277 LINC01124-201ENST00000409786 2117 ntBASIC13.45□□□□□ -0.26
TRAV22A0A0B4J277 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV22A0A0B4J277 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV22A0A0B4J277 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV22A0A0B4J277 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV22A0A0B4J277 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms