Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV9A0A0B4J1U6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV9A0A0B4J1U6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV9A0A0B4J1U6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV9A0A0B4J1U6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV9A0A0B4J1U6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV9A0A0B4J1U6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.92■□□□□ 0.62
TRBV9A0A0B4J1U6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV9A0A0B4J1U6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV9A0A0B4J1U6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV9A0A0B4J1U6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV9A0A0B4J1U6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV9A0A0B4J1U6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV9A0A0B4J1U6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRBV9A0A0B4J1U6 RP9P-202ENST00000450133 1212 ntBASIC18.91■□□□□ 0.62
TRBV9A0A0B4J1U6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV9A0A0B4J1U6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TRBV9A0A0B4J1U6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
TRBV9A0A0B4J1U6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV9A0A0B4J1U6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV9A0A0B4J1U6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV9A0A0B4J1U6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV9A0A0B4J1U6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV9A0A0B4J1U6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRBV9A0A0B4J1U6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV9A0A0B4J1U6 AC010501.1-201ENST00000606270 1962 ntBASIC18.9■□□□□ 0.62
TRBV9A0A0B4J1U6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV9A0A0B4J1U6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
TRBV9A0A0B4J1U6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV9A0A0B4J1U6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV9A0A0B4J1U6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
TRBV9A0A0B4J1U6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
TRBV9A0A0B4J1U6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TRBV9A0A0B4J1U6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV9A0A0B4J1U6 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.89■□□□□ 0.61
TRBV9A0A0B4J1U6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.89■□□□□ 0.61
TRBV9A0A0B4J1U6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV9A0A0B4J1U6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV9A0A0B4J1U6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRBV9A0A0B4J1U6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRBV9A0A0B4J1U6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV9A0A0B4J1U6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV9A0A0B4J1U6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRBV9A0A0B4J1U6 ERN1-208ENST00000606895 2068 ntBASIC18.88■□□□□ 0.61
TRBV9A0A0B4J1U6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV9A0A0B4J1U6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV9A0A0B4J1U6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV9A0A0B4J1U6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV9A0A0B4J1U6 HSD17B1P1-201ENST00000590052 955 ntBASIC18.88■□□□□ 0.61
TRBV9A0A0B4J1U6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV9A0A0B4J1U6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV9A0A0B4J1U6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV9A0A0B4J1U6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRBV9A0A0B4J1U6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV9A0A0B4J1U6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV9A0A0B4J1U6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV9A0A0B4J1U6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV9A0A0B4J1U6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.87■□□□□ 0.61
TRBV9A0A0B4J1U6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.87■□□□□ 0.61
TRBV9A0A0B4J1U6 AC093536.1-201ENST00000569153 554 ntBASIC18.87■□□□□ 0.61
TRBV9A0A0B4J1U6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.87■□□□□ 0.61
TRBV9A0A0B4J1U6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV9A0A0B4J1U6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV9A0A0B4J1U6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV9A0A0B4J1U6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
TRBV9A0A0B4J1U6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV9A0A0B4J1U6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV9A0A0B4J1U6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.86■□□□□ 0.61
TRBV9A0A0B4J1U6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV9A0A0B4J1U6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV9A0A0B4J1U6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV9A0A0B4J1U6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV9A0A0B4J1U6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV9A0A0B4J1U6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRBV9A0A0B4J1U6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV9A0A0B4J1U6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV9A0A0B4J1U6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV9A0A0B4J1U6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV9A0A0B4J1U6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV9A0A0B4J1U6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV9A0A0B4J1U6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRBV9A0A0B4J1U6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV9A0A0B4J1U6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV9A0A0B4J1U6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRBV9A0A0B4J1U6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRBV9A0A0B4J1U6 AC012676.1-201ENST00000574705 1949 ntBASIC18.83■□□□□ 0.6
TRBV9A0A0B4J1U6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV9A0A0B4J1U6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.83■□□□□ 0.6
TRBV9A0A0B4J1U6 RAP2CP1-202ENST00000605179 643 ntBASIC18.83■□□□□ 0.6
TRBV9A0A0B4J1U6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRBV9A0A0B4J1U6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.83■□□□□ 0.6
TRBV9A0A0B4J1U6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV9A0A0B4J1U6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV9A0A0B4J1U6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.82■□□□□ 0.6
TRBV9A0A0B4J1U6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV9A0A0B4J1U6 RARRES2P2-201ENST00000394842 485 ntBASIC18.82■□□□□ 0.6
TRBV9A0A0B4J1U6 AC026202.3-201ENST00000600805 1127 ntBASIC18.82■□□□□ 0.6
TRBV9A0A0B4J1U6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV9A0A0B4J1U6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV9A0A0B4J1U6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms