Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.61■□□□□ 0.73
TMEM56-RWDD3S4R434 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.61■□□□□ 0.73
TMEM56-RWDD3S4R434 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM56-RWDD3S4R434 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM56-RWDD3S4R434 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM56-RWDD3S4R434 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM56-RWDD3S4R434 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TMEM56-RWDD3S4R434 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM56-RWDD3S4R434 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM56-RWDD3S4R434 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM56-RWDD3S4R434 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM56-RWDD3S4R434 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.6■□□□□ 0.73
TMEM56-RWDD3S4R434 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM56-RWDD3S4R434 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM56-RWDD3S4R434 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TMEM56-RWDD3S4R434 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.59■□□□□ 0.73
TMEM56-RWDD3S4R434 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TMEM56-RWDD3S4R434 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM56-RWDD3S4R434 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM56-RWDD3S4R434 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM56-RWDD3S4R434 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM56-RWDD3S4R434 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM56-RWDD3S4R434 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM56-RWDD3S4R434 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.58■□□□□ 0.72
TMEM56-RWDD3S4R434 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TMEM56-RWDD3S4R434 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM56-RWDD3S4R434 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM56-RWDD3S4R434 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM56-RWDD3S4R434 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
TMEM56-RWDD3S4R434 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TMEM56-RWDD3S4R434 AC012676.1-201ENST00000574705 1949 ntBASIC19.57■□□□□ 0.72
TMEM56-RWDD3S4R434 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TMEM56-RWDD3S4R434 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM56-RWDD3S4R434 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM56-RWDD3S4R434 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TMEM56-RWDD3S4R434 DUX4L29-201ENST00000425409 679 ntBASIC19.56■□□□□ 0.72
TMEM56-RWDD3S4R434 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM56-RWDD3S4R434 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM56-RWDD3S4R434 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM56-RWDD3S4R434 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM56-RWDD3S4R434 LINC00543-201ENST00000567234 1845 ntBASIC19.55■□□□□ 0.72
TMEM56-RWDD3S4R434 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM56-RWDD3S4R434 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM56-RWDD3S4R434 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM56-RWDD3S4R434 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM56-RWDD3S4R434 AC097639.1-201ENST00000565519 1891 ntBASIC19.55■□□□□ 0.72
TMEM56-RWDD3S4R434 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM56-RWDD3S4R434 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM56-RWDD3S4R434 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM56-RWDD3S4R434 AL359504.2-201ENST00000605506 1601 ntBASIC19.54■□□□□ 0.72
TMEM56-RWDD3S4R434 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM56-RWDD3S4R434 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM56-RWDD3S4R434 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TMEM56-RWDD3S4R434 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TMEM56-RWDD3S4R434 AC008813.1-201ENST00000536597 885 ntBASIC19.54■□□□□ 0.72
TMEM56-RWDD3S4R434 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM56-RWDD3S4R434 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
TMEM56-RWDD3S4R434 SLC6A10P-202ENST00000431994 2058 ntBASIC19.53■□□□□ 0.72
TMEM56-RWDD3S4R434 MIR219A2-201ENST00000608502 1504 ntBASIC19.53■□□□□ 0.72
TMEM56-RWDD3S4R434 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TMEM56-RWDD3S4R434 AL162393.1-201ENST00000437852 946 ntBASIC19.53■□□□□ 0.72
TMEM56-RWDD3S4R434 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.53■□□□□ 0.72
TMEM56-RWDD3S4R434 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
TMEM56-RWDD3S4R434 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM56-RWDD3S4R434 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM56-RWDD3S4R434 AC133561.1-201ENST00000568600 2415 ntBASIC19.53■□□□□ 0.72
TMEM56-RWDD3S4R434 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM56-RWDD3S4R434 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM56-RWDD3S4R434 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TMEM56-RWDD3S4R434 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM56-RWDD3S4R434 AC148477.6-201ENST00000623746 465 ntBASIC19.52■□□□□ 0.72
TMEM56-RWDD3S4R434 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM56-RWDD3S4R434 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM56-RWDD3S4R434 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM56-RWDD3S4R434 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.52■□□□□ 0.72
TMEM56-RWDD3S4R434 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM56-RWDD3S4R434 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM56-RWDD3S4R434 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TMEM56-RWDD3S4R434 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM56-RWDD3S4R434 AC141586.4-201ENST00000624558 1573 ntBASIC19.51■□□□□ 0.71
TMEM56-RWDD3S4R434 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM56-RWDD3S4R434 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM56-RWDD3S4R434 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TMEM56-RWDD3S4R434 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM56-RWDD3S4R434 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM56-RWDD3S4R434 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM56-RWDD3S4R434 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM56-RWDD3S4R434 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM56-RWDD3S4R434 AL359258.2-201ENST00000564063 1566 ntBASIC19.49■□□□□ 0.71
TMEM56-RWDD3S4R434 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM56-RWDD3S4R434 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TMEM56-RWDD3S4R434 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM56-RWDD3S4R434 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM56-RWDD3S4R434 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM56-RWDD3S4R434 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM56-RWDD3S4R434 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM56-RWDD3S4R434 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM56-RWDD3S4R434 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM56-RWDD3S4R434 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM56-RWDD3S4R434 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 317 ms