Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA9Q9Y5G4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGA9Q9Y5G4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGA9Q9Y5G4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGA9Q9Y5G4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHGA9Q9Y5G4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.48■■□□□ 1.19
PCDHGA9Q9Y5G4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.48■■□□□ 1.19
PCDHGA9Q9Y5G4 Z92544.1-202ENST00000571933 1220 ntBASIC22.48■■□□□ 1.19
PCDHGA9Q9Y5G4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.48■■□□□ 1.19
PCDHGA9Q9Y5G4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGA9Q9Y5G4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGA9Q9Y5G4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGA9Q9Y5G4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGA9Q9Y5G4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGA9Q9Y5G4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGA9Q9Y5G4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PCDHGA9Q9Y5G4 RPS2P7-201ENST00000447334 885 ntBASIC22.47■■□□□ 1.19
PCDHGA9Q9Y5G4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDHGA9Q9Y5G4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDHGA9Q9Y5G4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGA9Q9Y5G4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGA9Q9Y5G4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGA9Q9Y5G4 LONRF2P2-201ENST00000439212 571 ntBASIC22.46■■□□□ 1.19
PCDHGA9Q9Y5G4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHGA9Q9Y5G4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA9Q9Y5G4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
PCDHGA9Q9Y5G4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
PCDHGA9Q9Y5G4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA9Q9Y5G4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHGA9Q9Y5G4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA9Q9Y5G4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA9Q9Y5G4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
PCDHGA9Q9Y5G4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA9Q9Y5G4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA9Q9Y5G4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA9Q9Y5G4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA9Q9Y5G4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA9Q9Y5G4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDHGA9Q9Y5G4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA9Q9Y5G4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHGA9Q9Y5G4 AC239859.2-201ENST00000444165 318 ntBASIC22.44■■□□□ 1.18
PCDHGA9Q9Y5G4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHGA9Q9Y5G4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
PCDHGA9Q9Y5G4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA9Q9Y5G4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDHGA9Q9Y5G4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
PCDHGA9Q9Y5G4 BX255925.1-201ENST00000566954 1854 ntBASIC22.43■■□□□ 1.18
PCDHGA9Q9Y5G4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA9Q9Y5G4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHGA9Q9Y5G4 KRT18P10-201ENST00000388836 1287 ntBASIC22.43■■□□□ 1.18
PCDHGA9Q9Y5G4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
PCDHGA9Q9Y5G4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA9Q9Y5G4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHGA9Q9Y5G4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA9Q9Y5G4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA9Q9Y5G4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGA9Q9Y5G4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA9Q9Y5G4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA9Q9Y5G4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
PCDHGA9Q9Y5G4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHGA9Q9Y5G4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA9Q9Y5G4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA9Q9Y5G4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA9Q9Y5G4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
PCDHGA9Q9Y5G4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
PCDHGA9Q9Y5G4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA9Q9Y5G4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHGA9Q9Y5G4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA9Q9Y5G4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGA9Q9Y5G4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PCDHGA9Q9Y5G4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA9Q9Y5G4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA9Q9Y5G4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA9Q9Y5G4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
PCDHGA9Q9Y5G4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGA9Q9Y5G4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA9Q9Y5G4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHGA9Q9Y5G4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA9Q9Y5G4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.39■■□□□ 1.17
PCDHGA9Q9Y5G4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA9Q9Y5G4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHGA9Q9Y5G4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA9Q9Y5G4 AC022616.5-201ENST00000518796 181 ntBASIC22.38■■□□□ 1.17
PCDHGA9Q9Y5G4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHGA9Q9Y5G4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHGA9Q9Y5G4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA9Q9Y5G4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA9Q9Y5G4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
PCDHGA9Q9Y5G4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA9Q9Y5G4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA9Q9Y5G4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
PCDHGA9Q9Y5G4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
PCDHGA9Q9Y5G4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA9Q9Y5G4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PCDHGA9Q9Y5G4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA9Q9Y5G4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA9Q9Y5G4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA9Q9Y5G4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHGA9Q9Y5G4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PCDHGA9Q9Y5G4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms