Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RCL1Q9Y2P8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RCL1Q9Y2P8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
RCL1Q9Y2P8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
RCL1Q9Y2P8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RCL1Q9Y2P8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RCL1Q9Y2P8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
RCL1Q9Y2P8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RCL1Q9Y2P8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RCL1Q9Y2P8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RCL1Q9Y2P8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.53■□□□□ 0.72
RCL1Q9Y2P8 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.53■□□□□ 0.72
RCL1Q9Y2P8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RCL1Q9Y2P8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RCL1Q9Y2P8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RCL1Q9Y2P8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RCL1Q9Y2P8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RCL1Q9Y2P8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RCL1Q9Y2P8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RCL1Q9Y2P8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RCL1Q9Y2P8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.52■□□□□ 0.72
RCL1Q9Y2P8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RCL1Q9Y2P8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.52■□□□□ 0.72
RCL1Q9Y2P8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RCL1Q9Y2P8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.52■□□□□ 0.72
RCL1Q9Y2P8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.52■□□□□ 0.71
RCL1Q9Y2P8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RCL1Q9Y2P8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RCL1Q9Y2P8 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.51■□□□□ 0.71
RCL1Q9Y2P8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.51■□□□□ 0.71
RCL1Q9Y2P8 AC068473.5-201ENST00000616428 2072 ntBASIC19.51■□□□□ 0.71
RCL1Q9Y2P8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RCL1Q9Y2P8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RCL1Q9Y2P8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RCL1Q9Y2P8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RCL1Q9Y2P8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RCL1Q9Y2P8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RCL1Q9Y2P8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RCL1Q9Y2P8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RCL1Q9Y2P8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.5■□□□□ 0.71
RCL1Q9Y2P8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RCL1Q9Y2P8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RCL1Q9Y2P8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RCL1Q9Y2P8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.49■□□□□ 0.71
RCL1Q9Y2P8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RCL1Q9Y2P8 SUZ12P1-203ENST00000578195 985 ntBASIC19.49■□□□□ 0.71
RCL1Q9Y2P8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.49■□□□□ 0.71
RCL1Q9Y2P8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RCL1Q9Y2P8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RCL1Q9Y2P8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RCL1Q9Y2P8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RCL1Q9Y2P8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RCL1Q9Y2P8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RCL1Q9Y2P8 AC097639.1-201ENST00000565519 1891 ntBASIC19.48■□□□□ 0.71
RCL1Q9Y2P8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
RCL1Q9Y2P8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RCL1Q9Y2P8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RCL1Q9Y2P8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RCL1Q9Y2P8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.48■□□□□ 0.71
RCL1Q9Y2P8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
RCL1Q9Y2P8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RCL1Q9Y2P8 AP003733.4-201ENST00000623785 1697 ntBASIC19.47■□□□□ 0.71
RCL1Q9Y2P8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RCL1Q9Y2P8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.47■□□□□ 0.71
RCL1Q9Y2P8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RCL1Q9Y2P8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
RCL1Q9Y2P8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RCL1Q9Y2P8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RCL1Q9Y2P8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RCL1Q9Y2P8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RCL1Q9Y2P8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RCL1Q9Y2P8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.46■□□□□ 0.71
RCL1Q9Y2P8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RCL1Q9Y2P8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
RCL1Q9Y2P8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RCL1Q9Y2P8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RCL1Q9Y2P8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RCL1Q9Y2P8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.45■□□□□ 0.7
RCL1Q9Y2P8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RCL1Q9Y2P8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RCL1Q9Y2P8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RCL1Q9Y2P8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RCL1Q9Y2P8 DUX4L28-201ENST00000623687 678 ntBASIC19.45■□□□□ 0.7
RCL1Q9Y2P8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RCL1Q9Y2P8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.44■□□□□ 0.7
RCL1Q9Y2P8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RCL1Q9Y2P8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.44■□□□□ 0.7
RCL1Q9Y2P8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RCL1Q9Y2P8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.44■□□□□ 0.7
RCL1Q9Y2P8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RCL1Q9Y2P8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.44■□□□□ 0.7
RCL1Q9Y2P8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RCL1Q9Y2P8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.43■□□□□ 0.7
RCL1Q9Y2P8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RCL1Q9Y2P8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RCL1Q9Y2P8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RCL1Q9Y2P8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RCL1Q9Y2P8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RCL1Q9Y2P8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.43■□□□□ 0.7
RCL1Q9Y2P8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms