Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC29.74■■■□□ 2.35
RTFDC1Q9BY42 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
RTFDC1Q9BY42 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
RTFDC1Q9BY42 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
RTFDC1Q9BY42 PEMT-206ENST00000435340 960 ntTSL 5 BASIC29.72■■■□□ 2.35
RTFDC1Q9BY42 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
RTFDC1Q9BY42 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC29.72■■■□□ 2.35
RTFDC1Q9BY42 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC29.72■■■□□ 2.35
RTFDC1Q9BY42 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
RTFDC1Q9BY42 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
RTFDC1Q9BY42 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
RTFDC1Q9BY42 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
RTFDC1Q9BY42 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC29.71■■■□□ 2.35
RTFDC1Q9BY42 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC29.71■■■□□ 2.35
RTFDC1Q9BY42 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
RTFDC1Q9BY42 AC137630.3-201ENST00000607245 391 ntBASIC29.7■■■□□ 2.35
RTFDC1Q9BY42 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
RTFDC1Q9BY42 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
RTFDC1Q9BY42 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RTFDC1Q9BY42 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RTFDC1Q9BY42 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC29.69■■■□□ 2.34
RTFDC1Q9BY42 AL449106.1-201ENST00000608517 1980 ntBASIC29.69■■■□□ 2.34
RTFDC1Q9BY42 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC29.68■■■□□ 2.34
RTFDC1Q9BY42 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RTFDC1Q9BY42 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RTFDC1Q9BY42 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC29.67■■■□□ 2.34
RTFDC1Q9BY42 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
RTFDC1Q9BY42 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
RTFDC1Q9BY42 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
RTFDC1Q9BY42 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC29.66■■■□□ 2.34
RTFDC1Q9BY42 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC29.66■■■□□ 2.34
RTFDC1Q9BY42 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RTFDC1Q9BY42 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RTFDC1Q9BY42 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
RTFDC1Q9BY42 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC29.65■■■□□ 2.34
RTFDC1Q9BY42 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
RTFDC1Q9BY42 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.65■■■□□ 2.34
RTFDC1Q9BY42 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
RTFDC1Q9BY42 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
RTFDC1Q9BY42 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
RTFDC1Q9BY42 KRT16P3-201ENST00000439127 1283 ntBASIC29.64■■■□□ 2.34
RTFDC1Q9BY42 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC29.64■■■□□ 2.34
RTFDC1Q9BY42 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
RTFDC1Q9BY42 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
RTFDC1Q9BY42 AC021242.3-201ENST00000607598 1377 ntBASIC29.64■■■□□ 2.33
RTFDC1Q9BY42 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC29.63■■■□□ 2.33
RTFDC1Q9BY42 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC29.62■■■□□ 2.33
RTFDC1Q9BY42 MIR935-201ENST00000401179 91 ntBASIC29.62■■■□□ 2.33
RTFDC1Q9BY42 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC29.62■■■□□ 2.33
RTFDC1Q9BY42 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
RTFDC1Q9BY42 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RTFDC1Q9BY42 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RTFDC1Q9BY42 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC29.61■■■□□ 2.33
RTFDC1Q9BY42 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
RTFDC1Q9BY42 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RTFDC1Q9BY42 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC29.61■■■□□ 2.33
RTFDC1Q9BY42 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
RTFDC1Q9BY42 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC29.6■■■□□ 2.33
RTFDC1Q9BY42 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC29.6■■■□□ 2.33
RTFDC1Q9BY42 AC120024.1-201ENST00000562672 995 ntBASIC29.6■■■□□ 2.33
RTFDC1Q9BY42 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
RTFDC1Q9BY42 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC29.59■■■□□ 2.33
RTFDC1Q9BY42 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RTFDC1Q9BY42 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC29.59■■■□□ 2.33
RTFDC1Q9BY42 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
RTFDC1Q9BY42 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RTFDC1Q9BY42 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
RTFDC1Q9BY42 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
RTFDC1Q9BY42 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
RTFDC1Q9BY42 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RTFDC1Q9BY42 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
RTFDC1Q9BY42 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC29.56■■■□□ 2.32
RTFDC1Q9BY42 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RTFDC1Q9BY42 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC29.55■■■□□ 2.32
RTFDC1Q9BY42 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC29.55■■■□□ 2.32
RTFDC1Q9BY42 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
RTFDC1Q9BY42 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
RTFDC1Q9BY42 MIR638-201ENST00000385237 100 ntBASIC29.55■■■□□ 2.32
RTFDC1Q9BY42 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC29.55■■■□□ 2.32
RTFDC1Q9BY42 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC29.55■■■□□ 2.32
RTFDC1Q9BY42 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC29.55■■■□□ 2.32
RTFDC1Q9BY42 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
RTFDC1Q9BY42 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
RTFDC1Q9BY42 LINC01003-201ENST00000564834 1764 ntBASIC29.54■■■□□ 2.32
RTFDC1Q9BY42 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
RTFDC1Q9BY42 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
RTFDC1Q9BY42 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
RTFDC1Q9BY42 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RTFDC1Q9BY42 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
RTFDC1Q9BY42 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC29.53■■■□□ 2.32
RTFDC1Q9BY42 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
RTFDC1Q9BY42 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RTFDC1Q9BY42 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RTFDC1Q9BY42 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC29.52■■■□□ 2.32
RTFDC1Q9BY42 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
RTFDC1Q9BY42 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RTFDC1Q9BY42 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC29.52■■■□□ 2.32
RTFDC1Q9BY42 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC29.51■■■□□ 2.31
RTFDC1Q9BY42 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC29.51■■■□□ 2.31
RTFDC1Q9BY42 TSPY9P-201ENST00000440215 945 ntBASIC29.51■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms