Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL512631.2-201ENST00000604634 923 ntBASIC32.85■■■□□ 2.85
ABCA3Q99758 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
ABCA3Q99758 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC32.84■■■□□ 2.85
ABCA3Q99758 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
ABCA3Q99758 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC32.84■■■□□ 2.85
ABCA3Q99758 SENP5-202ENST00000419026 973 ntTSL 3 BASIC32.84■■■□□ 2.85
ABCA3Q99758 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
ABCA3Q99758 QDPR-206ENST00000508623 601 ntTSL 3 BASIC32.83■■■□□ 2.85
ABCA3Q99758 AC120024.1-201ENST00000562672 995 ntBASIC32.83■■■□□ 2.85
ABCA3Q99758 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
ABCA3Q99758 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC32.83■■■□□ 2.85
ABCA3Q99758 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
ABCA3Q99758 MIR4466-201ENST00000606121 54 ntBASIC32.82■■■□□ 2.85
ABCA3Q99758 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC32.82■■■□□ 2.85
ABCA3Q99758 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC32.82■■■□□ 2.84
ABCA3Q99758 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC32.82■■■□□ 2.84
ABCA3Q99758 AC092028.1-203ENST00000608262 953 ntBASIC32.82■■■□□ 2.84
ABCA3Q99758 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
ABCA3Q99758 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC32.81■■■□□ 2.84
ABCA3Q99758 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
ABCA3Q99758 RARRES2P6-201ENST00000567333 442 ntBASIC32.81■■■□□ 2.84
ABCA3Q99758 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC32.81■■■□□ 2.84
ABCA3Q99758 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
ABCA3Q99758 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC32.8■■■□□ 2.84
ABCA3Q99758 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
ABCA3Q99758 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC32.8■■■□□ 2.84
ABCA3Q99758 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC32.8■■■□□ 2.84
ABCA3Q99758 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC32.8■■■□□ 2.84
ABCA3Q99758 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
ABCA3Q99758 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
ABCA3Q99758 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
ABCA3Q99758 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
ABCA3Q99758 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC32.78■■■□□ 2.84
ABCA3Q99758 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC32.78■■■□□ 2.84
ABCA3Q99758 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC32.78■■■□□ 2.84
ABCA3Q99758 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC32.77■■■□□ 2.84
ABCA3Q99758 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC32.77■■■□□ 2.84
ABCA3Q99758 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC32.77■■■□□ 2.84
ABCA3Q99758 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC32.75■■■□□ 2.83
ABCA3Q99758 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
ABCA3Q99758 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
ABCA3Q99758 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
ABCA3Q99758 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC32.74■■■□□ 2.83
ABCA3Q99758 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC32.74■■■□□ 2.83
ABCA3Q99758 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC32.74■■■□□ 2.83
ABCA3Q99758 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
ABCA3Q99758 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
ABCA3Q99758 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
ABCA3Q99758 GUK1-205ENST00000366722 850 ntTSL 3 BASIC32.73■■■□□ 2.83
ABCA3Q99758 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC32.73■■■□□ 2.83
ABCA3Q99758 MIR6724-1-201ENST00000616420 92 ntBASIC32.73■■■□□ 2.83
ABCA3Q99758 MIR6724-2-201ENST00000616483 92 ntBASIC32.73■■■□□ 2.83
ABCA3Q99758 MIR6724-4-201ENST00000617390 92 ntBASIC32.73■■■□□ 2.83
ABCA3Q99758 MIR6724-3-201ENST00000622482 92 ntBASIC32.73■■■□□ 2.83
ABCA3Q99758 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
ABCA3Q99758 AC096631.2-201ENST00000436136 790 ntBASIC32.72■■■□□ 2.83
ABCA3Q99758 MIR3621-201ENST00000580529 85 ntBASIC32.72■■■□□ 2.83
ABCA3Q99758 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
ABCA3Q99758 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
ABCA3Q99758 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC32.71■■■□□ 2.83
ABCA3Q99758 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC32.71■■■□□ 2.83
ABCA3Q99758 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
ABCA3Q99758 KRT18P10-201ENST00000388836 1287 ntBASIC32.71■■■□□ 2.83
ABCA3Q99758 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC32.71■■■□□ 2.83
ABCA3Q99758 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
ABCA3Q99758 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC32.71■■■□□ 2.83
ABCA3Q99758 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
ABCA3Q99758 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC32.71■■■□□ 2.83
ABCA3Q99758 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
ABCA3Q99758 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC32.71■■■□□ 2.83
ABCA3Q99758 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
ABCA3Q99758 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC32.7■■■□□ 2.83
ABCA3Q99758 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
ABCA3Q99758 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
ABCA3Q99758 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC32.7■■■□□ 2.83
ABCA3Q99758 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC32.69■■■□□ 2.82
ABCA3Q99758 MTDHP2-201ENST00000601468 714 ntBASIC32.69■■■□□ 2.82
ABCA3Q99758 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC32.68■■■□□ 2.82
ABCA3Q99758 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
ABCA3Q99758 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
ABCA3Q99758 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC32.67■■■□□ 2.82
ABCA3Q99758 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC32.67■■■□□ 2.82
ABCA3Q99758 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
ABCA3Q99758 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC32.66■■■□□ 2.82
ABCA3Q99758 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
ABCA3Q99758 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC32.65■■■□□ 2.82
ABCA3Q99758 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
ABCA3Q99758 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC32.65■■■□□ 2.82
ABCA3Q99758 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ABCA3Q99758 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
ABCA3Q99758 PROC-203ENST00000409048 1586 ntTSL 5 BASIC32.65■■■□□ 2.82
ABCA3Q99758 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC32.65■■■□□ 2.82
ABCA3Q99758 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC32.65■■■□□ 2.82
ABCA3Q99758 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC32.65■■■□□ 2.82
ABCA3Q99758 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC32.64■■■□□ 2.82
ABCA3Q99758 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC32.64■■■□□ 2.82
ABCA3Q99758 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC32.64■■■□□ 2.82
ABCA3Q99758 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.63■■■□□ 2.81
ABCA3Q99758 LSM4-201ENST00000252816 986 ntTSL 2 BASIC32.63■■■□□ 2.81
ABCA3Q99758 RASSF1-AS1-201ENST00000629828 790 ntBASIC32.63■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms