Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDH15Q96QU1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH15Q96QU1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH15Q96QU1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH15Q96QU1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDH15Q96QU1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDH15Q96QU1 AC131281.2-201ENST00000520478 145 ntBASIC23.85■■□□□ 1.41
PCDH15Q96QU1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH15Q96QU1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
PCDH15Q96QU1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDH15Q96QU1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH15Q96QU1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PCDH15Q96QU1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDH15Q96QU1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH15Q96QU1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
PCDH15Q96QU1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH15Q96QU1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH15Q96QU1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDH15Q96QU1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
PCDH15Q96QU1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDH15Q96QU1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH15Q96QU1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH15Q96QU1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH15Q96QU1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH15Q96QU1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH15Q96QU1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.81■■□□□ 1.4
PCDH15Q96QU1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PCDH15Q96QU1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH15Q96QU1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.8■■□□□ 1.4
PCDH15Q96QU1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PCDH15Q96QU1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH15Q96QU1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH15Q96QU1 KRT18P24-201ENST00000344739 1156 ntBASIC23.8■■□□□ 1.4
PCDH15Q96QU1 AC137630.3-201ENST00000607245 391 ntBASIC23.8■■□□□ 1.4
PCDH15Q96QU1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH15Q96QU1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH15Q96QU1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDH15Q96QU1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.78■■□□□ 1.4
PCDH15Q96QU1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH15Q96QU1 LINC01003-201ENST00000564834 1764 ntBASIC23.78■■□□□ 1.4
PCDH15Q96QU1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH15Q96QU1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PCDH15Q96QU1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.77■■□□□ 1.4
PCDH15Q96QU1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH15Q96QU1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
PCDH15Q96QU1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH15Q96QU1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH15Q96QU1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PCDH15Q96QU1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.76■■□□□ 1.39
PCDH15Q96QU1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.76■■□□□ 1.39
PCDH15Q96QU1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
PCDH15Q96QU1 AC021242.3-201ENST00000607598 1377 ntBASIC23.75■■□□□ 1.39
PCDH15Q96QU1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.75■■□□□ 1.39
PCDH15Q96QU1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH15Q96QU1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH15Q96QU1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.74■■□□□ 1.39
PCDH15Q96QU1 KRT18P10-201ENST00000388836 1287 ntBASIC23.74■■□□□ 1.39
PCDH15Q96QU1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.74■■□□□ 1.39
PCDH15Q96QU1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDH15Q96QU1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDH15Q96QU1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH15Q96QU1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH15Q96QU1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.74■■□□□ 1.39
PCDH15Q96QU1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH15Q96QU1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH15Q96QU1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH15Q96QU1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.73■■□□□ 1.39
PCDH15Q96QU1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH15Q96QU1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH15Q96QU1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH15Q96QU1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH15Q96QU1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDH15Q96QU1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.72■■□□□ 1.39
PCDH15Q96QU1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDH15Q96QU1 MIR4281-201ENST00000580852 62 ntBASIC23.72■■□□□ 1.39
PCDH15Q96QU1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH15Q96QU1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDH15Q96QU1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDH15Q96QU1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH15Q96QU1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.71■■□□□ 1.39
PCDH15Q96QU1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH15Q96QU1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDH15Q96QU1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH15Q96QU1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH15Q96QU1 AL449106.1-201ENST00000608517 1980 ntBASIC23.7■■□□□ 1.38
PCDH15Q96QU1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDH15Q96QU1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH15Q96QU1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH15Q96QU1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDH15Q96QU1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDH15Q96QU1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH15Q96QU1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH15Q96QU1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH15Q96QU1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH15Q96QU1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
PCDH15Q96QU1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDH15Q96QU1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDH15Q96QU1 AC120024.1-201ENST00000562672 995 ntBASIC23.68■■□□□ 1.38
PCDH15Q96QU1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDH15Q96QU1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms