Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDND2Q8NHS1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDND2Q8NHS1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.34■□□□□ 0.85
CLDND2Q8NHS1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDND2Q8NHS1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDND2Q8NHS1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDND2Q8NHS1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDND2Q8NHS1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDND2Q8NHS1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.33■□□□□ 0.85
CLDND2Q8NHS1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLDND2Q8NHS1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDND2Q8NHS1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDND2Q8NHS1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDND2Q8NHS1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDND2Q8NHS1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
CLDND2Q8NHS1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CLDND2Q8NHS1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLDND2Q8NHS1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLDND2Q8NHS1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.32■□□□□ 0.84
CLDND2Q8NHS1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDND2Q8NHS1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDND2Q8NHS1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDND2Q8NHS1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDND2Q8NHS1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.32■□□□□ 0.84
CLDND2Q8NHS1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CLDND2Q8NHS1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDND2Q8NHS1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDND2Q8NHS1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CLDND2Q8NHS1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDND2Q8NHS1 KRT8P33-201ENST00000508125 1423 ntBASIC20.31■□□□□ 0.84
CLDND2Q8NHS1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDND2Q8NHS1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDND2Q8NHS1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDND2Q8NHS1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDND2Q8NHS1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDND2Q8NHS1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDND2Q8NHS1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDND2Q8NHS1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDND2Q8NHS1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDND2Q8NHS1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDND2Q8NHS1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CLDND2Q8NHS1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLDND2Q8NHS1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CLDND2Q8NHS1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CLDND2Q8NHS1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.3■□□□□ 0.84
CLDND2Q8NHS1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDND2Q8NHS1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDND2Q8NHS1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.29■□□□□ 0.84
CLDND2Q8NHS1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.29■□□□□ 0.84
CLDND2Q8NHS1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.29■□□□□ 0.84
CLDND2Q8NHS1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDND2Q8NHS1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CLDND2Q8NHS1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDND2Q8NHS1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLDND2Q8NHS1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.29■□□□□ 0.84
CLDND2Q8NHS1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDND2Q8NHS1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLDND2Q8NHS1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDND2Q8NHS1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDND2Q8NHS1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDND2Q8NHS1 AL451085.2-201ENST00000605085 799 ntBASIC20.28■□□□□ 0.84
CLDND2Q8NHS1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDND2Q8NHS1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDND2Q8NHS1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.27■□□□□ 0.84
CLDND2Q8NHS1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CLDND2Q8NHS1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDND2Q8NHS1 PVT1_1.1-201ENST00000615125 194 ntBASIC20.27■□□□□ 0.84
CLDND2Q8NHS1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.27■□□□□ 0.83
CLDND2Q8NHS1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.26■□□□□ 0.83
CLDND2Q8NHS1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDND2Q8NHS1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CLDND2Q8NHS1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
CLDND2Q8NHS1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDND2Q8NHS1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDND2Q8NHS1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDND2Q8NHS1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDND2Q8NHS1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDND2Q8NHS1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDND2Q8NHS1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDND2Q8NHS1 YBX1P4-201ENST00000392794 808 ntBASIC20.25■□□□□ 0.83
CLDND2Q8NHS1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDND2Q8NHS1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.25■□□□□ 0.83
CLDND2Q8NHS1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.25■□□□□ 0.83
CLDND2Q8NHS1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDND2Q8NHS1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.25■□□□□ 0.83
CLDND2Q8NHS1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLDND2Q8NHS1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDND2Q8NHS1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDND2Q8NHS1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.24■□□□□ 0.83
CLDND2Q8NHS1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLDND2Q8NHS1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDND2Q8NHS1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDND2Q8NHS1 AC103834.1-201ENST00000520383 144 ntBASIC20.24■□□□□ 0.83
CLDND2Q8NHS1 AL035685.1-201ENST00000636663 812 ntBASIC20.24■□□□□ 0.83
CLDND2Q8NHS1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDND2Q8NHS1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDND2Q8NHS1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CLDND2Q8NHS1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDND2Q8NHS1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDND2Q8NHS1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 3503 ms