Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 RRP17YDR412W 708 nt6.12□□□□□ -1.43
YLR040CQ07988 YER138W-AYER138W-A 105 nt6.12□□□□□ -1.43
YLR040CQ07988 HMS2YJR147W 1077 nt6.12□□□□□ -1.43
YLR040CQ07988 CLN1YMR199W 1641 nt6.12□□□□□ -1.43
YLR040CQ07988 PPA2YMR267W 933 nt6.12□□□□□ -1.43
YLR040CQ07988 YBL107W-AYBL107W-A 105 nt6.12□□□□□ -1.43
YLR040CQ07988 PPM2YOL141W 2088 nt6.12□□□□□ -1.43
YLR040CQ07988 DCP1YOL149W 696 nt6.12□□□□□ -1.43
YLR040CQ07988 ELP3YPL086C 1674 nt6.12□□□□□ -1.43
YLR040CQ07988 CTF18YMR078C 2226 nt6.11□□□□□ -1.43
YLR040CQ07988 YEL050W-AYEL050W-A 192 nt6.11□□□□□ -1.43
YLR040CQ07988 YPT1YFL038C 621 nt6.11□□□□□ -1.43
YLR040CQ07988 FZF1YGL254W 900 nt6.11□□□□□ -1.43
YLR040CQ07988 PRI1YIR008C 1230 nt6.11□□□□□ -1.43
YLR040CQ07988 ATG36YJL185C 882 nt6.11□□□□□ -1.43
YLR040CQ07988 MER1YNL210W 813 nt6.11□□□□□ -1.43
YLR040CQ07988 MSO1YNR049C 633 nt6.11□□□□□ -1.43
YLR040CQ07988 TMA46YOR091W 1038 nt6.11□□□□□ -1.43
YLR040CQ07988 BAG7YOR134W 1230 nt6.11□□□□□ -1.43
YLR040CQ07988 ERG10YPL028W 1197 nt6.11□□□□□ -1.43
YLR040CQ07988 IPI3YNL182C 1668 nt6.1□□□□□ -1.43
YLR040CQ07988 PLB3YOL011W 2061 nt6.1□□□□□ -1.43
YLR040CQ07988 NMT1YLR195C 1368 nt6.1□□□□□ -1.43
YLR040CQ07988 YGL235WYGL235W 537 nt6.1□□□□□ -1.43
YLR040CQ07988 OKP1YGR179C 1221 nt6.1□□□□□ -1.43
YLR040CQ07988 CYS3YAL012W 1185 nt6.1□□□□□ -1.43
YLR040CQ07988 YLL056CYLL056C 897 nt6.1□□□□□ -1.43
YLR040CQ07988 YLR162WYLR162W 357 nt6.1□□□□□ -1.43
YLR040CQ07988 ERG29YMR134W 714 nt6.1□□□□□ -1.43
YLR040CQ07988 MRPL19YNL185C 477 nt6.1□□□□□ -1.43
YLR040CQ07988 YBR226CYBR226C 411 nt6.1□□□□□ -1.43
YLR040CQ07988 SKY1YMR216C 2229 nt6.1□□□□□ -1.43
YLR040CQ07988 GLE1YDL207W 1617 nt6.1□□□□□ -1.43
YLR040CQ07988 HEM1YDR232W 1647 nt6.1□□□□□ -1.43
YLR040CQ07988 YFR006WYFR006W 1608 nt6.1□□□□□ -1.43
YLR040CQ07988 NUR1YDL089W 1455 nt6.09□□□□□ -1.43
YLR040CQ07988 PAF1YBR279W 1338 nt6.09□□□□□ -1.43
YLR040CQ07988 MCM21YDR318W 1107 nt6.09□□□□□ -1.43
YLR040CQ07988 SUF5tG(CCC)O 72 nt6.09□□□□□ -1.43
YLR040CQ07988 TIF2YJL138C 1188 nt6.09□□□□□ -1.43
YLR040CQ07988 TIF1YKR059W 1188 nt6.09□□□□□ -1.43
YLR040CQ07988 RNH1YMR234W 1047 nt6.09□□□□□ -1.43
YLR040CQ07988 PUS4YNL292W 1212 nt6.09□□□□□ -1.43
YLR040CQ07988 RAD17YOR368W 1206 nt6.09□□□□□ -1.43
YLR040CQ07988 BTS1YPL069C 1008 nt6.09□□□□□ -1.43
YLR040CQ07988 EMP65YER140W 1671 nt6.09□□□□□ -1.43
YLR040CQ07988 ICP55YER078C 1536 nt6.09□□□□□ -1.44
YLR040CQ07988 ENP1YBR247C 1452 nt6.09□□□□□ -1.44
YLR040CQ07988 STT3YGL022W 2157 nt6.08□□□□□ -1.44
YLR040CQ07988 FRE5YOR384W 2085 nt6.08□□□□□ -1.44
YLR040CQ07988 RPN5YDL147W 1338 nt6.08□□□□□ -1.44
YLR040CQ07988 CLD1YGR110W 1338 nt6.08□□□□□ -1.44
YLR040CQ07988 HED1YDR014W-A 489 nt6.08□□□□□ -1.44
YLR040CQ07988 XPT1YJR133W 630 nt6.08□□□□□ -1.44
YLR040CQ07988 SEC62YPL094C 825 nt6.08□□□□□ -1.44
YLR040CQ07988 EDE1YBL047C 4146 nt6.08□□□□□ -1.44
YLR040CQ07988 HXT15YDL245C 1704 nt6.08□□□□□ -1.44
YLR040CQ07988 HXT16YJR158W 1704 nt6.08□□□□□ -1.44
YLR040CQ07988 SES1YDR023W 1389 nt6.07□□□□□ -1.44
YLR040CQ07988 KAR1YNL188W 1302 nt6.07□□□□□ -1.44
YLR040CQ07988 FPR2YDR519W 408 nt6.07□□□□□ -1.44
YLR040CQ07988 MSP1YGR028W 1089 nt6.07□□□□□ -1.44
YLR040CQ07988 POR2YIL114C 846 nt6.07□□□□□ -1.44
YLR040CQ07988 MIA40YKL195W 1212 nt6.07□□□□□ -1.44
YLR040CQ07988 PFA4YOL003C 1137 nt6.07□□□□□ -1.44
YLR040CQ07988 YBR113WYBR113W 483 nt6.07□□□□□ -1.44
YLR040CQ07988 SPO77YLR341W 1434 nt6.07□□□□□ -1.44
YLR040CQ07988 PHO3YBR092C 1404 nt6.07□□□□□ -1.44
YLR040CQ07988 CDC16YKL022C 2523 nt6.06□□□□□ -1.44
YLR040CQ07988 PMT3YOR321W 2262 nt6.06□□□□□ -1.44
YLR040CQ07988 MSC3YLR219W 2187 nt6.06□□□□□ -1.44
YLR040CQ07988 ENT5YDR153C 1236 nt6.06□□□□□ -1.44
YLR040CQ07988 TCA17YEL048C 459 nt6.06□□□□□ -1.44
YLR040CQ07988 SWD1YAR003W 1281 nt6.06□□□□□ -1.44
YLR040CQ07988 AIM33YML087C 939 nt6.06□□□□□ -1.44
YLR040CQ07988 RCE1YMR274C 948 nt6.06□□□□□ -1.44
YLR040CQ07988 COX5AYNL052W 462 nt6.06□□□□□ -1.44
YLR040CQ07988 DFR1YOR236W 636 nt6.06□□□□□ -1.44
YLR040CQ07988 SLM4YBR077C 489 nt6.06□□□□□ -1.44
YLR040CQ07988 Q0017Q0017 162 nt6.06□□□□□ -1.44
YLR040CQ07988 YPR204WYPR204W 3099 nt6.06□□□□□ -1.44
YLR040CQ07988 SMF3YLR034C 1422 nt6.06□□□□□ -1.44
YLR040CQ07988 JIP4YDR475C 2631 nt6.05□□□□□ -1.44
YLR040CQ07988 GCV1YDR019C 1203 nt6.05□□□□□ -1.44
YLR040CQ07988 DIN7YDR263C 1293 nt6.05□□□□□ -1.44
YLR040CQ07988 ERP2YAL007C 648 nt6.05□□□□□ -1.44
YLR040CQ07988 YKL018C-AYKL018C-A 300 nt6.05□□□□□ -1.44
YLR040CQ07988 YNL228WYNL228W 777 nt6.05□□□□□ -1.44
YLR040CQ07988 HAT1YPL001W 1125 nt6.05□□□□□ -1.44
YLR040CQ07988 COQ1YBR003W 1422 nt6.05□□□□□ -1.44
YLR040CQ07988 ERG12YMR208W 1332 nt6.04□□□□□ -1.44
YLR040CQ07988 LSM6YDR378C 261 nt6.04□□□□□ -1.44
YLR040CQ07988 YDR401WYDR401W 564 nt6.04□□□□□ -1.44
YLR040CQ07988 YIR043CYIR043C 693 nt6.04□□□□□ -1.44
YLR040CQ07988 FBA1YKL060C 1080 nt6.04□□□□□ -1.44
YLR040CQ07988 FIT2YOR382W 462 nt6.04□□□□□ -1.44
YLR040CQ07988 NUP49YGL172W 1419 nt6.04□□□□□ -1.44
YLR040CQ07988 POX1YGL205W 2247 nt6.03□□□□□ -1.44
YLR040CQ07988 GLN3YER040W 2193 nt6.03□□□□□ -1.44
YLR040CQ07988 RRP46YGR095C 672 nt6.03□□□□□ -1.44
Retrieved 100 of 7,029 protein–RNA pairs in 70 ms