Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.15■■□□□ 1.62
LRRC3BQ96PB8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LRRC3BQ96PB8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LRRC3BQ96PB8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.15■■□□□ 1.62
LRRC3BQ96PB8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.15■■□□□ 1.62
LRRC3BQ96PB8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.15■■□□□ 1.62
LRRC3BQ96PB8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LRRC3BQ96PB8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
LRRC3BQ96PB8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
LRRC3BQ96PB8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
LRRC3BQ96PB8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.14■■□□□ 1.62
LRRC3BQ96PB8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
LRRC3BQ96PB8 AL592295.1-201ENST00000400984 884 ntBASIC25.14■■□□□ 1.62
LRRC3BQ96PB8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
LRRC3BQ96PB8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
LRRC3BQ96PB8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
LRRC3BQ96PB8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
LRRC3BQ96PB8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LRRC3BQ96PB8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
LRRC3BQ96PB8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
LRRC3BQ96PB8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
LRRC3BQ96PB8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LRRC3BQ96PB8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.12■■□□□ 1.61
LRRC3BQ96PB8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.12■■□□□ 1.61
LRRC3BQ96PB8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.12■■□□□ 1.61
LRRC3BQ96PB8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
LRRC3BQ96PB8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LRRC3BQ96PB8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LRRC3BQ96PB8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.11■■□□□ 1.61
LRRC3BQ96PB8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LRRC3BQ96PB8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
LRRC3BQ96PB8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LRRC3BQ96PB8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
LRRC3BQ96PB8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LRRC3BQ96PB8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LRRC3BQ96PB8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LRRC3BQ96PB8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.1■■□□□ 1.61
LRRC3BQ96PB8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.1■■□□□ 1.61
LRRC3BQ96PB8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
LRRC3BQ96PB8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
LRRC3BQ96PB8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LRRC3BQ96PB8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LRRC3BQ96PB8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LRRC3BQ96PB8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LRRC3BQ96PB8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRRC3BQ96PB8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LRRC3BQ96PB8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.09■■□□□ 1.61
LRRC3BQ96PB8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRRC3BQ96PB8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.09■■□□□ 1.61
LRRC3BQ96PB8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.08■■□□□ 1.61
LRRC3BQ96PB8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
LRRC3BQ96PB8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
LRRC3BQ96PB8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
LRRC3BQ96PB8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
LRRC3BQ96PB8 THA1P-201ENST00000590384 1145 ntBASIC25.07■■□□□ 1.6
LRRC3BQ96PB8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LRRC3BQ96PB8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LRRC3BQ96PB8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
LRRC3BQ96PB8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LRRC3BQ96PB8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LRRC3BQ96PB8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.06■■□□□ 1.6
LRRC3BQ96PB8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
LRRC3BQ96PB8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LRRC3BQ96PB8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.05■■□□□ 1.6
LRRC3BQ96PB8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LRRC3BQ96PB8 BX255925.1-201ENST00000566954 1854 ntBASIC25.04■■□□□ 1.6
LRRC3BQ96PB8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
LRRC3BQ96PB8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LRRC3BQ96PB8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.04■■□□□ 1.6
LRRC3BQ96PB8 AC131212.1-201ENST00000613771 668 ntBASIC25.04■■□□□ 1.6
LRRC3BQ96PB8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LRRC3BQ96PB8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LRRC3BQ96PB8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.03■■□□□ 1.6
LRRC3BQ96PB8 AC239859.2-201ENST00000444165 318 ntBASIC25.03■■□□□ 1.6
LRRC3BQ96PB8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LRRC3BQ96PB8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LRRC3BQ96PB8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LRRC3BQ96PB8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
LRRC3BQ96PB8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LRRC3BQ96PB8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.02■■□□□ 1.6
LRRC3BQ96PB8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LRRC3BQ96PB8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.02■■□□□ 1.6
LRRC3BQ96PB8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
LRRC3BQ96PB8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LRRC3BQ96PB8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LRRC3BQ96PB8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.01■■□□□ 1.59
LRRC3BQ96PB8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LRRC3BQ96PB8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
LRRC3BQ96PB8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.01■■□□□ 1.59
LRRC3BQ96PB8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
LRRC3BQ96PB8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LRRC3BQ96PB8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LRRC3BQ96PB8 AL356441.2-201ENST00000443009 864 ntBASIC25■■□□□ 1.59
LRRC3BQ96PB8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25■■□□□ 1.59
LRRC3BQ96PB8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
LRRC3BQ96PB8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25■■□□□ 1.59
LRRC3BQ96PB8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
LRRC3BQ96PB8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LRRC3BQ96PB8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.99■■□□□ 1.59
LRRC3BQ96PB8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms