Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
AP3S2P59780 LINC00543-201ENST00000567234 1845 ntBASIC20.69■□□□□ 0.9
AP3S2P59780 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
AP3S2P59780 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.69■□□□□ 0.9
AP3S2P59780 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AP3S2P59780 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.69■□□□□ 0.9
AP3S2P59780 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AP3S2P59780 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AP3S2P59780 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP3S2P59780 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.68■□□□□ 0.9
AP3S2P59780 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
AP3S2P59780 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP3S2P59780 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP3S2P59780 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP3S2P59780 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP3S2P59780 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.66■□□□□ 0.9
AP3S2P59780 AC068473.5-201ENST00000616428 2072 ntBASIC20.66■□□□□ 0.9
AP3S2P59780 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.66■□□□□ 0.9
AP3S2P59780 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3S2P59780 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
AP3S2P59780 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
AP3S2P59780 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP3S2P59780 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
AP3S2P59780 AC079834.2-201ENST00000609776 1949 ntBASIC20.65■□□□□ 0.9
AP3S2P59780 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP3S2P59780 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
AP3S2P59780 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP3S2P59780 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP3S2P59780 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
AP3S2P59780 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP3S2P59780 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
AP3S2P59780 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.64■□□□□ 0.9
AP3S2P59780 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
AP3S2P59780 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3S2P59780 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.64■□□□□ 0.89
AP3S2P59780 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3S2P59780 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.64■□□□□ 0.89
AP3S2P59780 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3S2P59780 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3S2P59780 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3S2P59780 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3S2P59780 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
AP3S2P59780 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.63■□□□□ 0.89
AP3S2P59780 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
AP3S2P59780 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3S2P59780 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
AP3S2P59780 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
AP3S2P59780 LINC00273-201ENST00000539813 1452 ntBASIC20.62■□□□□ 0.89
AP3S2P59780 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3S2P59780 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3S2P59780 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP3S2P59780 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3S2P59780 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3S2P59780 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP3S2P59780 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3S2P59780 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.62■□□□□ 0.89
AP3S2P59780 LINC01124-201ENST00000409786 2117 ntBASIC20.62■□□□□ 0.89
AP3S2P59780 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
AP3S2P59780 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.61■□□□□ 0.89
AP3S2P59780 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.61■□□□□ 0.89
AP3S2P59780 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3S2P59780 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AP3S2P59780 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3S2P59780 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.61■□□□□ 0.89
AP3S2P59780 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.61■□□□□ 0.89
AP3S2P59780 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.61■□□□□ 0.89
AP3S2P59780 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3S2P59780 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3S2P59780 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
AP3S2P59780 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
AP3S2P59780 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3S2P59780 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3S2P59780 AC097639.1-201ENST00000565519 1891 ntBASIC20.6■□□□□ 0.89
AP3S2P59780 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3S2P59780 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3S2P59780 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP3S2P59780 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP3S2P59780 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
AP3S2P59780 AP003733.4-201ENST00000623785 1697 ntBASIC20.59■□□□□ 0.89
AP3S2P59780 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP3S2P59780 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.59■□□□□ 0.89
AP3S2P59780 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
AP3S2P59780 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP3S2P59780 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
AP3S2P59780 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.58■□□□□ 0.89
AP3S2P59780 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.58■□□□□ 0.89
AP3S2P59780 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
AP3S2P59780 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP3S2P59780 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP3S2P59780 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP3S2P59780 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.58■□□□□ 0.88
AP3S2P59780 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP3S2P59780 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
AP3S2P59780 AL391121.1-201ENST00000607967 1349 ntBASIC20.57■□□□□ 0.88
AP3S2P59780 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.57■□□□□ 0.88
AP3S2P59780 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP3S2P59780 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3S2P59780 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.57■□□□□ 0.88
AP3S2P59780 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP3S2P59780 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms