Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB5CP51148 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
RAB5CP51148 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB5CP51148 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB5CP51148 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB5CP51148 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RAB5CP51148 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB5CP51148 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RAB5CP51148 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB5CP51148 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB5CP51148 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB5CP51148 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.39■□□□□ 0.7
RAB5CP51148 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB5CP51148 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB5CP51148 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB5CP51148 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB5CP51148 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB5CP51148 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB5CP51148 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB5CP51148 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB5CP51148 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB5CP51148 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB5CP51148 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB5CP51148 AC097639.1-201ENST00000565519 1891 ntBASIC19.38■□□□□ 0.69
RAB5CP51148 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB5CP51148 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB5CP51148 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RAB5CP51148 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB5CP51148 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RAB5CP51148 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB5CP51148 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB5CP51148 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB5CP51148 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB5CP51148 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB5CP51148 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB5CP51148 ZNRF2P1-201ENST00000441407 443 ntBASIC19.36■□□□□ 0.69
RAB5CP51148 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB5CP51148 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
RAB5CP51148 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB5CP51148 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB5CP51148 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB5CP51148 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB5CP51148 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB5CP51148 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB5CP51148 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB5CP51148 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB5CP51148 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB5CP51148 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.33■□□□□ 0.69
RAB5CP51148 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RAB5CP51148 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB5CP51148 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB5CP51148 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB5CP51148 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB5CP51148 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB5CP51148 LINC01124-201ENST00000409786 2117 ntBASIC19.32■□□□□ 0.68
RAB5CP51148 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB5CP51148 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB5CP51148 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB5CP51148 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RAB5CP51148 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB5CP51148 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB5CP51148 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RAB5CP51148 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB5CP51148 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB5CP51148 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB5CP51148 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.31■□□□□ 0.68
RAB5CP51148 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.31■□□□□ 0.68
RAB5CP51148 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB5CP51148 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB5CP51148 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB5CP51148 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB5CP51148 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB5CP51148 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB5CP51148 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB5CP51148 DUSP8P5-201ENST00000422884 1815 ntBASIC19.3■□□□□ 0.68
RAB5CP51148 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB5CP51148 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB5CP51148 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB5CP51148 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
RAB5CP51148 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB5CP51148 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB5CP51148 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB5CP51148 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB5CP51148 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB5CP51148 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB5CP51148 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB5CP51148 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB5CP51148 AC135983.2-203ENST00000454486 1613 ntBASIC19.29■□□□□ 0.68
RAB5CP51148 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB5CP51148 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB5CP51148 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB5CP51148 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB5CP51148 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB5CP51148 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB5CP51148 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB5CP51148 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB5CP51148 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB5CP51148 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB5CP51148 AP003733.4-201ENST00000623785 1697 ntBASIC19.27■□□□□ 0.68
RAB5CP51148 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms