Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
PCDHA13Q9Y5I0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHA13Q9Y5I0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHA13Q9Y5I0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.99■■□□□ 1.75
PCDHA13Q9Y5I0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
PCDHA13Q9Y5I0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDHA13Q9Y5I0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA13Q9Y5I0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA13Q9Y5I0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA13Q9Y5I0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
PCDHA13Q9Y5I0 AC142381.3-201ENST00000568208 1670 ntBASIC25.97■■□□□ 1.75
PCDHA13Q9Y5I0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA13Q9Y5I0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA13Q9Y5I0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.97■■□□□ 1.75
PCDHA13Q9Y5I0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA13Q9Y5I0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA13Q9Y5I0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA13Q9Y5I0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.96■■□□□ 1.75
PCDHA13Q9Y5I0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDHA13Q9Y5I0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA13Q9Y5I0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA13Q9Y5I0 LINC01971-201ENST00000617888 1048 ntBASIC25.95■■□□□ 1.74
PCDHA13Q9Y5I0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA13Q9Y5I0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA13Q9Y5I0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA13Q9Y5I0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.94■■□□□ 1.74
PCDHA13Q9Y5I0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
PCDHA13Q9Y5I0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHA13Q9Y5I0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
PCDHA13Q9Y5I0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.93■■□□□ 1.74
PCDHA13Q9Y5I0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.93■■□□□ 1.74
PCDHA13Q9Y5I0 AC096887.2-201ENST00000623443 1957 ntBASIC25.93■■□□□ 1.74
PCDHA13Q9Y5I0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA13Q9Y5I0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA13Q9Y5I0 AC022211.4-201ENST00000625094 2161 ntBASIC25.92■■□□□ 1.74
PCDHA13Q9Y5I0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 DUX4L13-201ENST00000554103 1267 ntBASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 DUX4L15-201ENST00000611059 1267 ntBASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 DUX4L23-201ENST00000615195 1269 ntBASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 DUX4L24-201ENST00000617576 1269 ntBASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 DUX4L22-201ENST00000618238 1269 ntBASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 DUX4L20-201ENST00000619712 1269 ntBASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 DUX4L21-201ENST00000622058 1269 ntBASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 DUX4L10-201ENST00000622460 1267 ntBASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 DUX4L25-201ENST00000624915 1269 ntBASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 MIR219A2-201ENST00000608502 1504 ntBASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA13Q9Y5I0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA13Q9Y5I0 AC008813.1-201ENST00000536597 885 ntBASIC25.9■■□□□ 1.74
PCDHA13Q9Y5I0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHA13Q9Y5I0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
PCDHA13Q9Y5I0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.89■■□□□ 1.74
PCDHA13Q9Y5I0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHA13Q9Y5I0 AC138932.3-201ENST00000567634 1902 ntBASIC25.89■■□□□ 1.74
PCDHA13Q9Y5I0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
PCDHA13Q9Y5I0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.89■■□□□ 1.73
PCDHA13Q9Y5I0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
PCDHA13Q9Y5I0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.73
PCDHA13Q9Y5I0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
PCDHA13Q9Y5I0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA13Q9Y5I0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
PCDHA13Q9Y5I0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.87■■□□□ 1.73
PCDHA13Q9Y5I0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.87■■□□□ 1.73
PCDHA13Q9Y5I0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.87■■□□□ 1.73
PCDHA13Q9Y5I0 AC148477.6-201ENST00000623746 465 ntBASIC25.87■■□□□ 1.73
PCDHA13Q9Y5I0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA13Q9Y5I0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA13Q9Y5I0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
PCDHA13Q9Y5I0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.86■■□□□ 1.73
PCDHA13Q9Y5I0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA13Q9Y5I0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA13Q9Y5I0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.86■■□□□ 1.73
PCDHA13Q9Y5I0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA13Q9Y5I0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA13Q9Y5I0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.85■■□□□ 1.73
PCDHA13Q9Y5I0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA13Q9Y5I0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA13Q9Y5I0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.84■■□□□ 1.73
PCDHA13Q9Y5I0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.84■■□□□ 1.73
PCDHA13Q9Y5I0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.84■■□□□ 1.73
PCDHA13Q9Y5I0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA13Q9Y5I0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA13Q9Y5I0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.83■■□□□ 1.73
PCDHA13Q9Y5I0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA13Q9Y5I0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDHA13Q9Y5I0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA13Q9Y5I0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.83■■□□□ 1.73
PCDHA13Q9Y5I0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA13Q9Y5I0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.83■■□□□ 1.73
PCDHA13Q9Y5I0 AL359504.2-201ENST00000605506 1601 ntBASIC25.82■■□□□ 1.72
PCDHA13Q9Y5I0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA13Q9Y5I0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA13Q9Y5I0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.82■■□□□ 1.72
PCDHA13Q9Y5I0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA13Q9Y5I0 AL359258.2-201ENST00000564063 1566 ntBASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms