Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.11■□□□□ 0.65
NPIPB3Q92617 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NPIPB3Q92617 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPB3Q92617 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPB3Q92617 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPB3Q92617 AC008813.1-201ENST00000536597 885 ntBASIC19.11■□□□□ 0.65
NPIPB3Q92617 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.1■□□□□ 0.65
NPIPB3Q92617 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NPIPB3Q92617 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPB3Q92617 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.1■□□□□ 0.65
NPIPB3Q92617 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPB3Q92617 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPB3Q92617 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPB3Q92617 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NPIPB3Q92617 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPB3Q92617 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPB3Q92617 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.09■□□□□ 0.65
NPIPB3Q92617 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
NPIPB3Q92617 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NPIPB3Q92617 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPB3Q92617 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NPIPB3Q92617 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPB3Q92617 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.09■□□□□ 0.65
NPIPB3Q92617 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.09■□□□□ 0.65
NPIPB3Q92617 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
NPIPB3Q92617 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.08■□□□□ 0.65
NPIPB3Q92617 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NPIPB3Q92617 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPB3Q92617 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPB3Q92617 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
NPIPB3Q92617 MIR219A2-201ENST00000608502 1504 ntBASIC19.08■□□□□ 0.64
NPIPB3Q92617 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
NPIPB3Q92617 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPB3Q92617 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPB3Q92617 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.07■□□□□ 0.64
NPIPB3Q92617 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.07■□□□□ 0.64
NPIPB3Q92617 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPB3Q92617 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPB3Q92617 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPB3Q92617 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
NPIPB3Q92617 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPB3Q92617 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
NPIPB3Q92617 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.06■□□□□ 0.64
NPIPB3Q92617 DUX4L11-201ENST00000611504 1267 ntBASIC19.06■□□□□ 0.64
NPIPB3Q92617 DUX4L12-201ENST00000614593 1267 ntBASIC19.06■□□□□ 0.64
NPIPB3Q92617 DUX4L14-201ENST00000621227 1267 ntBASIC19.06■□□□□ 0.64
NPIPB3Q92617 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPB3Q92617 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPB3Q92617 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPB3Q92617 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPB3Q92617 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
NPIPB3Q92617 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPB3Q92617 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPB3Q92617 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPB3Q92617 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPB3Q92617 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPB3Q92617 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.05■□□□□ 0.64
NPIPB3Q92617 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPB3Q92617 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPB3Q92617 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPB3Q92617 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.04■□□□□ 0.64
NPIPB3Q92617 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPB3Q92617 AC148477.6-201ENST00000623746 465 ntBASIC19.04■□□□□ 0.64
NPIPB3Q92617 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPB3Q92617 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPB3Q92617 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPB3Q92617 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
NPIPB3Q92617 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.04■□□□□ 0.64
NPIPB3Q92617 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.03■□□□□ 0.64
NPIPB3Q92617 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPB3Q92617 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.03■□□□□ 0.64
NPIPB3Q92617 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPB3Q92617 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPB3Q92617 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPB3Q92617 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NPIPB3Q92617 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
NPIPB3Q92617 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPB3Q92617 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
NPIPB3Q92617 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPIPB3Q92617 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPIPB3Q92617 AL359258.2-201ENST00000564063 1566 ntBASIC19.02■□□□□ 0.63
NPIPB3Q92617 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NPIPB3Q92617 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPB3Q92617 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPB3Q92617 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPB3Q92617 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.01■□□□□ 0.63
NPIPB3Q92617 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPB3Q92617 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19■□□□□ 0.63
NPIPB3Q92617 HES6-205ENST00000409356 528 ntTSL 2 BASIC19■□□□□ 0.63
NPIPB3Q92617 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPIPB3Q92617 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPIPB3Q92617 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPB3Q92617 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPIPB3Q92617 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPB3Q92617 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.99■□□□□ 0.63
NPIPB3Q92617 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.99■□□□□ 0.63
NPIPB3Q92617 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPB3Q92617 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
NPIPB3Q92617 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPB3Q92617 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms