Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
RETREG2Q8NC44 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RETREG2Q8NC44 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
RETREG2Q8NC44 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RETREG2Q8NC44 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
RETREG2Q8NC44 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.62■■■□□ 2.01
RETREG2Q8NC44 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
RETREG2Q8NC44 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.61■■■□□ 2.01
RETREG2Q8NC44 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
RETREG2Q8NC44 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
RETREG2Q8NC44 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
RETREG2Q8NC44 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
RETREG2Q8NC44 BHLHE23-202ENST00000612929 1109 ntBASIC27.6■■■□□ 2.01
RETREG2Q8NC44 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RETREG2Q8NC44 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RETREG2Q8NC44 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
RETREG2Q8NC44 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.6■■■□□ 2.01
RETREG2Q8NC44 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.59■■■□□ 2.01
RETREG2Q8NC44 RP9P-202ENST00000450133 1212 ntBASIC27.59■■■□□ 2.01
RETREG2Q8NC44 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC27.59■■■□□ 2.01
RETREG2Q8NC44 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RETREG2Q8NC44 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
RETREG2Q8NC44 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.59■■■□□ 2.01
RETREG2Q8NC44 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.58■■■□□ 2.01
RETREG2Q8NC44 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC27.58■■■□□ 2.01
RETREG2Q8NC44 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
RETREG2Q8NC44 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RETREG2Q8NC44 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
RETREG2Q8NC44 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.57■■■□□ 2
RETREG2Q8NC44 AC025884.2-201ENST00000553429 711 ntBASIC27.57■■■□□ 2
RETREG2Q8NC44 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.57■■■□□ 2
RETREG2Q8NC44 AL035685.1-201ENST00000636663 812 ntBASIC27.57■■■□□ 2
RETREG2Q8NC44 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.56■■■□□ 2
RETREG2Q8NC44 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.56■■■□□ 2
RETREG2Q8NC44 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
RETREG2Q8NC44 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
RETREG2Q8NC44 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.55■■■□□ 2
RETREG2Q8NC44 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.55■■■□□ 2
RETREG2Q8NC44 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.55■■■□□ 2
RETREG2Q8NC44 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.54■■■□□ 2
RETREG2Q8NC44 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC27.54■■■□□ 2
RETREG2Q8NC44 DUX4L9-201ENST00000449051 1259 ntBASIC27.54■■■□□ 2
RETREG2Q8NC44 AC093536.1-201ENST00000569153 554 ntBASIC27.54■■■□□ 2
RETREG2Q8NC44 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.54■■■□□ 2
RETREG2Q8NC44 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
RETREG2Q8NC44 AL451085.2-201ENST00000605085 799 ntBASIC27.53■■■□□ 2
RETREG2Q8NC44 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.52■■■□□ 2
RETREG2Q8NC44 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.52■■■□□ 2
RETREG2Q8NC44 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC27.52■■■□□ 2
RETREG2Q8NC44 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RETREG2Q8NC44 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
RETREG2Q8NC44 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
RETREG2Q8NC44 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
RETREG2Q8NC44 AC074183.2-201ENST00000623112 922 ntBASIC27.51■■□□□ 1.99
RETREG2Q8NC44 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RETREG2Q8NC44 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RETREG2Q8NC44 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
RETREG2Q8NC44 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RETREG2Q8NC44 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
RETREG2Q8NC44 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.51■■□□□ 1.99
RETREG2Q8NC44 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.5■■□□□ 1.99
RETREG2Q8NC44 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.5■■□□□ 1.99
RETREG2Q8NC44 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
RETREG2Q8NC44 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.49■■□□□ 1.99
RETREG2Q8NC44 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
RETREG2Q8NC44 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
RETREG2Q8NC44 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.49■■□□□ 1.99
RETREG2Q8NC44 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
RETREG2Q8NC44 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
RETREG2Q8NC44 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
RETREG2Q8NC44 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
RETREG2Q8NC44 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27.48■■□□□ 1.99
RETREG2Q8NC44 TRIR-205ENST00000592273 783 ntTSL 3 BASIC27.48■■□□□ 1.99
RETREG2Q8NC44 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
RETREG2Q8NC44 AC010980.1-201ENST00000587192 1142 ntBASIC27.47■■□□□ 1.99
RETREG2Q8NC44 RAP2CP1-202ENST00000605179 643 ntBASIC27.47■■□□□ 1.99
RETREG2Q8NC44 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
RETREG2Q8NC44 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
RETREG2Q8NC44 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
RETREG2Q8NC44 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.47■■□□□ 1.99
RETREG2Q8NC44 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC27.46■■□□□ 1.99
RETREG2Q8NC44 WHAMMP3-201ENST00000611636 1609 ntBASIC27.46■■□□□ 1.99
RETREG2Q8NC44 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.46■■□□□ 1.99
RETREG2Q8NC44 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.46■■□□□ 1.99
RETREG2Q8NC44 AC139795.1-202ENST00000500444 432 ntBASIC27.46■■□□□ 1.99
RETREG2Q8NC44 MIR3960-201ENST00000583311 91 ntBASIC27.46■■□□□ 1.99
RETREG2Q8NC44 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.46■■□□□ 1.99
RETREG2Q8NC44 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
RETREG2Q8NC44 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
RETREG2Q8NC44 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.45■■□□□ 1.98
RETREG2Q8NC44 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
RETREG2Q8NC44 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.45■■□□□ 1.98
RETREG2Q8NC44 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
RETREG2Q8NC44 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
RETREG2Q8NC44 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RETREG2Q8NC44 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC27.44■■□□□ 1.98
RETREG2Q8NC44 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RETREG2Q8NC44 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.43■■□□□ 1.98
RETREG2Q8NC44 KRT8P33-201ENST00000508125 1423 ntBASIC27.43■■□□□ 1.98
RETREG2Q8NC44 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC27.43■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms