Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
RC3H1Q5TC82 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
RC3H1Q5TC82 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RC3H1Q5TC82 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
RC3H1Q5TC82 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.39■■■□□ 2.62
RC3H1Q5TC82 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.39■■■□□ 2.62
RC3H1Q5TC82 RPS2P7-201ENST00000447334 885 ntBASIC31.39■■■□□ 2.62
RC3H1Q5TC82 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.39■■■□□ 2.61
RC3H1Q5TC82 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
RC3H1Q5TC82 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.38■■■□□ 2.61
RC3H1Q5TC82 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.38■■■□□ 2.61
RC3H1Q5TC82 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.38■■■□□ 2.61
RC3H1Q5TC82 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
RC3H1Q5TC82 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
RC3H1Q5TC82 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.37■■■□□ 2.61
RC3H1Q5TC82 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RC3H1Q5TC82 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.37■■■□□ 2.61
RC3H1Q5TC82 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
RC3H1Q5TC82 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
RC3H1Q5TC82 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.36■■■□□ 2.61
RC3H1Q5TC82 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
RC3H1Q5TC82 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
RC3H1Q5TC82 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
RC3H1Q5TC82 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
RC3H1Q5TC82 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.35■■■□□ 2.61
RC3H1Q5TC82 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RC3H1Q5TC82 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
RC3H1Q5TC82 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.35■■■□□ 2.61
RC3H1Q5TC82 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
RC3H1Q5TC82 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RC3H1Q5TC82 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
RC3H1Q5TC82 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.33■■■□□ 2.61
RC3H1Q5TC82 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RC3H1Q5TC82 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RC3H1Q5TC82 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.32■■■□□ 2.6
RC3H1Q5TC82 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
RC3H1Q5TC82 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
RC3H1Q5TC82 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RC3H1Q5TC82 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.31■■■□□ 2.6
RC3H1Q5TC82 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RC3H1Q5TC82 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RC3H1Q5TC82 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.3■■■□□ 2.6
RC3H1Q5TC82 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RC3H1Q5TC82 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
RC3H1Q5TC82 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RC3H1Q5TC82 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.28■■■□□ 2.6
RC3H1Q5TC82 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RC3H1Q5TC82 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RC3H1Q5TC82 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RC3H1Q5TC82 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.27■■■□□ 2.6
RC3H1Q5TC82 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
RC3H1Q5TC82 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RC3H1Q5TC82 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
RC3H1Q5TC82 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC31.26■■■□□ 2.59
RC3H1Q5TC82 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
RC3H1Q5TC82 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
RC3H1Q5TC82 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.26■■■□□ 2.59
RC3H1Q5TC82 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RC3H1Q5TC82 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
RC3H1Q5TC82 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.25■■■□□ 2.59
RC3H1Q5TC82 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
RC3H1Q5TC82 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RC3H1Q5TC82 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.24■■■□□ 2.59
RC3H1Q5TC82 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.24■■■□□ 2.59
RC3H1Q5TC82 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.23■■■□□ 2.59
RC3H1Q5TC82 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
RC3H1Q5TC82 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RC3H1Q5TC82 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
RC3H1Q5TC82 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
RC3H1Q5TC82 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RC3H1Q5TC82 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
RC3H1Q5TC82 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.21■■■□□ 2.59
RC3H1Q5TC82 AC022616.5-201ENST00000518796 181 ntBASIC31.2■■■□□ 2.59
RC3H1Q5TC82 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.2■■■□□ 2.59
RC3H1Q5TC82 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.2■■■□□ 2.58
RC3H1Q5TC82 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RC3H1Q5TC82 AC008406.3-201ENST00000620001 1374 ntBASIC31.19■■■□□ 2.58
RC3H1Q5TC82 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RC3H1Q5TC82 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
RC3H1Q5TC82 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC31.19■■■□□ 2.58
RC3H1Q5TC82 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.19■■■□□ 2.58
RC3H1Q5TC82 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
RC3H1Q5TC82 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.18■■■□□ 2.58
RC3H1Q5TC82 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
RC3H1Q5TC82 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RC3H1Q5TC82 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RC3H1Q5TC82 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RC3H1Q5TC82 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
RC3H1Q5TC82 MIR4787-201ENST00000607364 84 ntBASIC31.17■■■□□ 2.58
RC3H1Q5TC82 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
RC3H1Q5TC82 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
RC3H1Q5TC82 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.17■■■□□ 2.58
RC3H1Q5TC82 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
RC3H1Q5TC82 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC31.16■■■□□ 2.58
RC3H1Q5TC82 KRT125P-201ENST00000546827 989 ntBASIC31.16■■■□□ 2.58
RC3H1Q5TC82 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
RC3H1Q5TC82 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RC3H1Q5TC82 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.15■■■□□ 2.58
RC3H1Q5TC82 KRT18P10-201ENST00000388836 1287 ntBASIC31.15■■■□□ 2.58
RC3H1Q5TC82 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.15■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms