Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.63■■□□□ 1.85
TTC3P53804 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.63■■□□□ 1.85
TTC3P53804 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.63■■□□□ 1.85
TTC3P53804 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
TTC3P53804 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.63■■□□□ 1.85
TTC3P53804 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TTC3P53804 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.63■■□□□ 1.85
TTC3P53804 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TTC3P53804 AC018755.3-202ENST00000596210 929 ntBASIC26.63■■□□□ 1.85
TTC3P53804 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
TTC3P53804 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
TTC3P53804 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
TTC3P53804 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
TTC3P53804 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.61■■□□□ 1.85
TTC3P53804 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
TTC3P53804 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
TTC3P53804 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
TTC3P53804 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.59■■□□□ 1.85
TTC3P53804 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TTC3P53804 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
TTC3P53804 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
TTC3P53804 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
TTC3P53804 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
TTC3P53804 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
TTC3P53804 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TTC3P53804 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TTC3P53804 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TTC3P53804 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
TTC3P53804 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
TTC3P53804 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
TTC3P53804 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TTC3P53804 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.56■■□□□ 1.84
TTC3P53804 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TTC3P53804 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.56■■□□□ 1.84
TTC3P53804 AC131212.1-201ENST00000613771 668 ntBASIC26.56■■□□□ 1.84
TTC3P53804 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TTC3P53804 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TTC3P53804 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TTC3P53804 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
TTC3P53804 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
TTC3P53804 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.55■■□□□ 1.84
TTC3P53804 AC087393.1-201ENST00000582896 145 ntBASIC26.55■■□□□ 1.84
TTC3P53804 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.55■■□□□ 1.84
TTC3P53804 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
TTC3P53804 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC3P53804 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.54■■□□□ 1.84
TTC3P53804 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC3P53804 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC3P53804 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
TTC3P53804 AC019171.1-201ENST00000601251 1056 ntBASIC26.54■■□□□ 1.84
TTC3P53804 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC3P53804 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.53■■□□□ 1.84
TTC3P53804 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TTC3P53804 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.53■■□□□ 1.84
TTC3P53804 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.53■■□□□ 1.84
TTC3P53804 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TTC3P53804 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.53■■□□□ 1.84
TTC3P53804 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TTC3P53804 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TTC3P53804 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TTC3P53804 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TTC3P53804 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
TTC3P53804 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.51■■□□□ 1.83
TTC3P53804 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
TTC3P53804 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TTC3P53804 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
TTC3P53804 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.51■■□□□ 1.83
TTC3P53804 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
TTC3P53804 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TTC3P53804 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
TTC3P53804 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TTC3P53804 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TTC3P53804 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.49■■□□□ 1.83
TTC3P53804 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.49■■□□□ 1.83
TTC3P53804 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TTC3P53804 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.49■■□□□ 1.83
TTC3P53804 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.49■■□□□ 1.83
TTC3P53804 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.48■■□□□ 1.83
TTC3P53804 AL031848.2-201ENST00000607670 837 ntBASIC26.48■■□□□ 1.83
TTC3P53804 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.48■■□□□ 1.83
TTC3P53804 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TTC3P53804 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TTC3P53804 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TTC3P53804 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
TTC3P53804 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.47■■□□□ 1.83
TTC3P53804 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TTC3P53804 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
TTC3P53804 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
TTC3P53804 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.47■■□□□ 1.83
TTC3P53804 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TTC3P53804 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
TTC3P53804 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
TTC3P53804 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
TTC3P53804 THA1P-201ENST00000590384 1145 ntBASIC26.44■■□□□ 1.82
TTC3P53804 DRD5P2-201ENST00000421395 2012 ntBASIC26.44■■□□□ 1.82
TTC3P53804 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.44■■□□□ 1.82
TTC3P53804 RPS2P7-201ENST00000447334 885 ntBASIC26.44■■□□□ 1.82
TTC3P53804 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.44■■□□□ 1.82
TTC3P53804 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.44■■□□□ 1.82
TTC3P53804 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms