Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.63■■□□□ 1.85
TTC3P53804 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.63■■□□□ 1.85
TTC3P53804 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.63■■□□□ 1.85
TTC3P53804 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
TTC3P53804 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.63■■□□□ 1.85
TTC3P53804 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TTC3P53804 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.63■■□□□ 1.85
TTC3P53804 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TTC3P53804 AC018755.3-202ENST00000596210 929 ntBASIC26.63■■□□□ 1.85
TTC3P53804 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
TTC3P53804 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
TTC3P53804 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
TTC3P53804 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
TTC3P53804 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.61■■□□□ 1.85
TTC3P53804 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
TTC3P53804 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
TTC3P53804 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
TTC3P53804 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.59■■□□□ 1.85
TTC3P53804 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TTC3P53804 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
TTC3P53804 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
TTC3P53804 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
TTC3P53804 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
TTC3P53804 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
TTC3P53804 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TTC3P53804 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TTC3P53804 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TTC3P53804 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
TTC3P53804 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
TTC3P53804 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
TTC3P53804 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TTC3P53804 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.56■■□□□ 1.84
TTC3P53804 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TTC3P53804 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.56■■□□□ 1.84
TTC3P53804 AC131212.1-201ENST00000613771 668 ntBASIC26.56■■□□□ 1.84
TTC3P53804 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TTC3P53804 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TTC3P53804 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TTC3P53804 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
TTC3P53804 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
TTC3P53804 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.55■■□□□ 1.84
TTC3P53804 AC087393.1-201ENST00000582896 145 ntBASIC26.55■■□□□ 1.84
TTC3P53804 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.55■■□□□ 1.84
TTC3P53804 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
TTC3P53804 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC3P53804 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.54■■□□□ 1.84
TTC3P53804 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC3P53804 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC3P53804 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
TTC3P53804 AC019171.1-201ENST00000601251 1056 ntBASIC26.54■■□□□ 1.84
TTC3P53804 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC3P53804 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.53■■□□□ 1.84
TTC3P53804 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TTC3P53804 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.53■■□□□ 1.84
TTC3P53804 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.53■■□□□ 1.84
TTC3P53804 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TTC3P53804 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.53■■□□□ 1.84
TTC3P53804 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TTC3P53804 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TTC3P53804 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TTC3P53804 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TTC3P53804 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
TTC3P53804 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.51■■□□□ 1.83
TTC3P53804 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
TTC3P53804 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TTC3P53804 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
TTC3P53804 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.51■■□□□ 1.83
TTC3P53804 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
TTC3P53804 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TTC3P53804 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
TTC3P53804 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TTC3P53804 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TTC3P53804 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.49■■□□□ 1.83
TTC3P53804 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.49■■□□□ 1.83
TTC3P53804 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TTC3P53804 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.49■■□□□ 1.83
TTC3P53804 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.49■■□□□ 1.83
TTC3P53804 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.48■■□□□ 1.83
TTC3P53804 AL031848.2-201ENST00000607670 837 ntBASIC26.48■■□□□ 1.83
TTC3P53804 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.48■■□□□ 1.83
TTC3P53804 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TTC3P53804 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TTC3P53804 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TTC3P53804 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
TTC3P53804 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.47■■□□□ 1.83
TTC3P53804 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TTC3P53804 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
TTC3P53804 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
TTC3P53804 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.47■■□□□ 1.83
TTC3P53804 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TTC3P53804 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
TTC3P53804 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
TTC3P53804 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
TTC3P53804 THA1P-201ENST00000590384 1145 ntBASIC26.44■■□□□ 1.82
TTC3P53804 DRD5P2-201ENST00000421395 2012 ntBASIC26.44■■□□□ 1.82
TTC3P53804 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.44■■□□□ 1.82
TTC3P53804 RPS2P7-201ENST00000447334 885 ntBASIC26.44■■□□□ 1.82
TTC3P53804 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.44■■□□□ 1.82
TTC3P53804 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.44■■□□□ 1.82
TTC3P53804 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms