Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDM4BO94953 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.13■□□□□ 0.97
KDM4BO94953 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.13■□□□□ 0.97
KDM4BO94953 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDM4BO94953 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDM4BO94953 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDM4BO94953 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDM4BO94953 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KDM4BO94953 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.12■□□□□ 0.97
KDM4BO94953 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDM4BO94953 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KDM4BO94953 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.11■□□□□ 0.97
KDM4BO94953 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.11■□□□□ 0.97
KDM4BO94953 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
KDM4BO94953 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
KDM4BO94953 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.11■□□□□ 0.97
KDM4BO94953 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
KDM4BO94953 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KDM4BO94953 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
KDM4BO94953 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KDM4BO94953 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.1■□□□□ 0.97
KDM4BO94953 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.1■□□□□ 0.97
KDM4BO94953 LINC01971-201ENST00000617888 1048 ntBASIC21.1■□□□□ 0.97
KDM4BO94953 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KDM4BO94953 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KDM4BO94953 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.1■□□□□ 0.97
KDM4BO94953 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.1■□□□□ 0.97
KDM4BO94953 AC142472.1-201ENST00000612013 1741 ntBASIC21.09■□□□□ 0.97
KDM4BO94953 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.09■□□□□ 0.97
KDM4BO94953 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KDM4BO94953 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KDM4BO94953 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KDM4BO94953 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KDM4BO94953 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KDM4BO94953 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.08■□□□□ 0.97
KDM4BO94953 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
KDM4BO94953 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.07■□□□□ 0.96
KDM4BO94953 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KDM4BO94953 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KDM4BO94953 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KDM4BO94953 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
KDM4BO94953 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KDM4BO94953 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
KDM4BO94953 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KDM4BO94953 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
KDM4BO94953 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
KDM4BO94953 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
KDM4BO94953 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KDM4BO94953 ERN1-208ENST00000606895 2068 ntBASIC21.06■□□□□ 0.96
KDM4BO94953 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KDM4BO94953 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
KDM4BO94953 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
KDM4BO94953 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KDM4BO94953 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KDM4BO94953 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KDM4BO94953 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KDM4BO94953 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KDM4BO94953 WHAMMP3-201ENST00000611636 1609 ntBASIC21.04■□□□□ 0.96
KDM4BO94953 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.04■□□□□ 0.96
KDM4BO94953 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.04■□□□□ 0.96
KDM4BO94953 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KDM4BO94953 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.03■□□□□ 0.96
KDM4BO94953 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4BO94953 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4BO94953 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
KDM4BO94953 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L13-201ENST00000554103 1267 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L15-201ENST00000611059 1267 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L23-201ENST00000615195 1269 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L24-201ENST00000617576 1269 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L22-201ENST00000618238 1269 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L20-201ENST00000619712 1269 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L21-201ENST00000622058 1269 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L10-201ENST00000622460 1267 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L25-201ENST00000624915 1269 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4BO94953 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4BO94953 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
KDM4BO94953 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4BO94953 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.02■□□□□ 0.95
KDM4BO94953 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KDM4BO94953 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM4BO94953 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM4BO94953 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
KDM4BO94953 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.01■□□□□ 0.95
KDM4BO94953 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
KDM4BO94953 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21■□□□□ 0.95
KDM4BO94953 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21■□□□□ 0.95
KDM4BO94953 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21■□□□□ 0.95
KDM4BO94953 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KDM4BO94953 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21■□□□□ 0.95
KDM4BO94953 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
KDM4BO94953 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KDM4BO94953 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KDM4BO94953 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.99■□□□□ 0.95
KDM4BO94953 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.99■□□□□ 0.95
KDM4BO94953 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KDM4BO94953 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
KDM4BO94953 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDM4BO94953 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms