Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.74■□□□□ 0.75
SSSCA1O60232 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSSCA1O60232 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSSCA1O60232 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSSCA1O60232 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSSCA1O60232 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.73■□□□□ 0.75
SSSCA1O60232 AC022211.4-201ENST00000625094 2161 ntBASIC19.73■□□□□ 0.75
SSSCA1O60232 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSSCA1O60232 AC138932.3-201ENST00000567634 1902 ntBASIC19.73■□□□□ 0.75
SSSCA1O60232 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSSCA1O60232 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSSCA1O60232 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.73■□□□□ 0.75
SSSCA1O60232 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSSCA1O60232 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSSCA1O60232 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.73■□□□□ 0.75
SSSCA1O60232 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.72■□□□□ 0.75
SSSCA1O60232 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSSCA1O60232 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSSCA1O60232 AL139125.2-201ENST00000623134 1869 ntBASIC19.72■□□□□ 0.75
SSSCA1O60232 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSSCA1O60232 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSSCA1O60232 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SSSCA1O60232 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSSCA1O60232 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.71■□□□□ 0.75
SSSCA1O60232 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
SSSCA1O60232 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSSCA1O60232 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
SSSCA1O60232 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.7■□□□□ 0.74
SSSCA1O60232 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSSCA1O60232 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.7■□□□□ 0.74
SSSCA1O60232 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSSCA1O60232 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SSSCA1O60232 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SSSCA1O60232 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SSSCA1O60232 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSSCA1O60232 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.69■□□□□ 0.74
SSSCA1O60232 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.69■□□□□ 0.74
SSSCA1O60232 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.69■□□□□ 0.74
SSSCA1O60232 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSSCA1O60232 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.69■□□□□ 0.74
SSSCA1O60232 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSSCA1O60232 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.68■□□□□ 0.74
SSSCA1O60232 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.68■□□□□ 0.74
SSSCA1O60232 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
SSSCA1O60232 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSSCA1O60232 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.68■□□□□ 0.74
SSSCA1O60232 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.68■□□□□ 0.74
SSSCA1O60232 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSSCA1O60232 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSSCA1O60232 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSSCA1O60232 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSSCA1O60232 AC110285.7-201ENST00000624417 1536 ntBASIC19.67■□□□□ 0.74
SSSCA1O60232 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSSCA1O60232 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.67■□□□□ 0.74
SSSCA1O60232 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSSCA1O60232 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSSCA1O60232 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSSCA1O60232 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SSSCA1O60232 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.67■□□□□ 0.74
SSSCA1O60232 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSSCA1O60232 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SSSCA1O60232 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSSCA1O60232 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSSCA1O60232 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSSCA1O60232 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.66■□□□□ 0.74
SSSCA1O60232 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSSCA1O60232 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.66■□□□□ 0.74
SSSCA1O60232 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.66■□□□□ 0.74
SSSCA1O60232 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSSCA1O60232 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SSSCA1O60232 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.65■□□□□ 0.74
SSSCA1O60232 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSSCA1O60232 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSSCA1O60232 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSSCA1O60232 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSSCA1O60232 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SSSCA1O60232 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.65■□□□□ 0.74
SSSCA1O60232 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSSCA1O60232 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSSCA1O60232 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SSSCA1O60232 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.64■□□□□ 0.73
SSSCA1O60232 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSSCA1O60232 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSSCA1O60232 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSSCA1O60232 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSSCA1O60232 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSSCA1O60232 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SSSCA1O60232 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.63■□□□□ 0.73
SSSCA1O60232 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSSCA1O60232 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.63■□□□□ 0.73
SSSCA1O60232 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSSCA1O60232 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SSSCA1O60232 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSSCA1O60232 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSSCA1O60232 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SSSCA1O60232 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSSCA1O60232 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.62■□□□□ 0.73
SSSCA1O60232 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
SSSCA1O60232 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSSCA1O60232 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 401.3 ms