Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
LAMB4A4D0S4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.35■■■□□ 2.61
LAMB4A4D0S4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.35■■■□□ 2.61
LAMB4A4D0S4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
LAMB4A4D0S4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.35■■■□□ 2.61
LAMB4A4D0S4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
LAMB4A4D0S4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
LAMB4A4D0S4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.34■■■□□ 2.61
LAMB4A4D0S4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
LAMB4A4D0S4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
LAMB4A4D0S4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
LAMB4A4D0S4 AC010980.1-201ENST00000587192 1142 ntBASIC31.34■■■□□ 2.61
LAMB4A4D0S4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
LAMB4A4D0S4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
LAMB4A4D0S4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
LAMB4A4D0S4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
LAMB4A4D0S4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.33■■■□□ 2.61
LAMB4A4D0S4 BX255925.1-201ENST00000566954 1854 ntBASIC31.33■■■□□ 2.61
LAMB4A4D0S4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
LAMB4A4D0S4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
LAMB4A4D0S4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
LAMB4A4D0S4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
LAMB4A4D0S4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
LAMB4A4D0S4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
LAMB4A4D0S4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
LAMB4A4D0S4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
LAMB4A4D0S4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.31■■■□□ 2.6
LAMB4A4D0S4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.31■■■□□ 2.6
LAMB4A4D0S4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
LAMB4A4D0S4 AC142472.1-201ENST00000612013 1741 ntBASIC31.3■■■□□ 2.6
LAMB4A4D0S4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.3■■■□□ 2.6
LAMB4A4D0S4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
LAMB4A4D0S4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
LAMB4A4D0S4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.29■■■□□ 2.6
LAMB4A4D0S4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
LAMB4A4D0S4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
LAMB4A4D0S4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
LAMB4A4D0S4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
LAMB4A4D0S4 KRT8P33-201ENST00000508125 1423 ntBASIC31.27■■■□□ 2.6
LAMB4A4D0S4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
LAMB4A4D0S4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
LAMB4A4D0S4 AC103724.3-201ENST00000564481 992 ntBASIC31.26■■■□□ 2.59
LAMB4A4D0S4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
LAMB4A4D0S4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
LAMB4A4D0S4 AC009299.2-201ENST00000482477 511 ntBASIC31.25■■■□□ 2.59
LAMB4A4D0S4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.25■■■□□ 2.59
LAMB4A4D0S4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.25■■■□□ 2.59
LAMB4A4D0S4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
LAMB4A4D0S4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
LAMB4A4D0S4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
LAMB4A4D0S4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.24■■■□□ 2.59
LAMB4A4D0S4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
LAMB4A4D0S4 AC074183.2-201ENST00000623112 922 ntBASIC31.24■■■□□ 2.59
LAMB4A4D0S4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.23■■■□□ 2.59
LAMB4A4D0S4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
LAMB4A4D0S4 AL035685.1-201ENST00000636663 812 ntBASIC31.23■■■□□ 2.59
LAMB4A4D0S4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
LAMB4A4D0S4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
LAMB4A4D0S4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
LAMB4A4D0S4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
LAMB4A4D0S4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
LAMB4A4D0S4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.23■■■□□ 2.59
LAMB4A4D0S4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.23■■■□□ 2.59
LAMB4A4D0S4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.22■■■□□ 2.59
LAMB4A4D0S4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
LAMB4A4D0S4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
LAMB4A4D0S4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
LAMB4A4D0S4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
LAMB4A4D0S4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
LAMB4A4D0S4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
LAMB4A4D0S4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
LAMB4A4D0S4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
LAMB4A4D0S4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
LAMB4A4D0S4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.2■■■□□ 2.59
LAMB4A4D0S4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.2■■■□□ 2.59
LAMB4A4D0S4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
LAMB4A4D0S4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.2■■■□□ 2.59
LAMB4A4D0S4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.2■■■□□ 2.58
LAMB4A4D0S4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
LAMB4A4D0S4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
LAMB4A4D0S4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
LAMB4A4D0S4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LAMB4A4D0S4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LAMB4A4D0S4 AC103834.1-201ENST00000520383 144 ntBASIC31.18■■■□□ 2.58
LAMB4A4D0S4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LAMB4A4D0S4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.17■■■□□ 2.58
LAMB4A4D0S4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.17■■■□□ 2.58
LAMB4A4D0S4 AC087393.1-201ENST00000582896 145 ntBASIC31.17■■■□□ 2.58
LAMB4A4D0S4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
LAMB4A4D0S4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.17■■■□□ 2.58
LAMB4A4D0S4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
LAMB4A4D0S4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
LAMB4A4D0S4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.17■■■□□ 2.58
LAMB4A4D0S4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
LAMB4A4D0S4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
LAMB4A4D0S4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
LAMB4A4D0S4 BHLHE23-202ENST00000612929 1109 ntBASIC31.16■■■□□ 2.58
LAMB4A4D0S4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
LAMB4A4D0S4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
LAMB4A4D0S4 AC142086.6-201ENST00000621154 1765 ntBASIC31.15■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms