Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.72■■■□□ 2.67
PDZRN3Q9UPQ7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.72■■■□□ 2.67
PDZRN3Q9UPQ7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.71■■■□□ 2.67
PDZRN3Q9UPQ7 AL157400.5-201ENST00000507624 621 ntBASIC31.71■■■□□ 2.67
PDZRN3Q9UPQ7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PDZRN3Q9UPQ7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PDZRN3Q9UPQ7 AP002414.2-202ENST00000590929 1450 ntBASIC31.7■■■□□ 2.66
PDZRN3Q9UPQ7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
PDZRN3Q9UPQ7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
PDZRN3Q9UPQ7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PDZRN3Q9UPQ7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.69■■■□□ 2.66
PDZRN3Q9UPQ7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PDZRN3Q9UPQ7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
PDZRN3Q9UPQ7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
PDZRN3Q9UPQ7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.68■■■□□ 2.66
PDZRN3Q9UPQ7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.68■■■□□ 2.66
PDZRN3Q9UPQ7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC31.67■■■□□ 2.66
PDZRN3Q9UPQ7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PDZRN3Q9UPQ7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.67■■■□□ 2.66
PDZRN3Q9UPQ7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PDZRN3Q9UPQ7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
PDZRN3Q9UPQ7 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.66■■■□□ 2.66
PDZRN3Q9UPQ7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
PDZRN3Q9UPQ7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PDZRN3Q9UPQ7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
PDZRN3Q9UPQ7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PDZRN3Q9UPQ7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PDZRN3Q9UPQ7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PDZRN3Q9UPQ7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.63■■■□□ 2.65
PDZRN3Q9UPQ7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.62■■■□□ 2.65
PDZRN3Q9UPQ7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
PDZRN3Q9UPQ7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.62■■■□□ 2.65
PDZRN3Q9UPQ7 AL592293.1-201ENST00000502889 1188 ntBASIC31.62■■■□□ 2.65
PDZRN3Q9UPQ7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PDZRN3Q9UPQ7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
PDZRN3Q9UPQ7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.61■■■□□ 2.65
PDZRN3Q9UPQ7 AC133552.2-201ENST00000619106 1032 ntBASIC31.61■■■□□ 2.65
PDZRN3Q9UPQ7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
PDZRN3Q9UPQ7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PDZRN3Q9UPQ7 AC009831.1-201ENST00000580420 1582 ntBASIC31.6■■■□□ 2.65
PDZRN3Q9UPQ7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDZRN3Q9UPQ7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDZRN3Q9UPQ7 AL035685.1-201ENST00000636663 812 ntBASIC31.59■■■□□ 2.65
PDZRN3Q9UPQ7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDZRN3Q9UPQ7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PDZRN3Q9UPQ7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PDZRN3Q9UPQ7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PDZRN3Q9UPQ7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PDZRN3Q9UPQ7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PDZRN3Q9UPQ7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PDZRN3Q9UPQ7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.58■■■□□ 2.65
PDZRN3Q9UPQ7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
PDZRN3Q9UPQ7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.57■■■□□ 2.64
PDZRN3Q9UPQ7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
PDZRN3Q9UPQ7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
PDZRN3Q9UPQ7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.57■■■□□ 2.64
PDZRN3Q9UPQ7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
PDZRN3Q9UPQ7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PDZRN3Q9UPQ7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.56■■■□□ 2.64
PDZRN3Q9UPQ7 DUX4L18-201ENST00000553347 1267 ntBASIC31.55■■■□□ 2.64
PDZRN3Q9UPQ7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
PDZRN3Q9UPQ7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
PDZRN3Q9UPQ7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
PDZRN3Q9UPQ7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
PDZRN3Q9UPQ7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
PDZRN3Q9UPQ7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
PDZRN3Q9UPQ7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.54■■■□□ 2.64
PDZRN3Q9UPQ7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.54■■■□□ 2.64
PDZRN3Q9UPQ7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC31.54■■■□□ 2.64
PDZRN3Q9UPQ7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PDZRN3Q9UPQ7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PDZRN3Q9UPQ7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
PDZRN3Q9UPQ7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.53■■■□□ 2.64
PDZRN3Q9UPQ7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
PDZRN3Q9UPQ7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
PDZRN3Q9UPQ7 SMPD5-203ENST00000639008 1464 ntBASIC31.52■■■□□ 2.64
PDZRN3Q9UPQ7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
PDZRN3Q9UPQ7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
PDZRN3Q9UPQ7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PDZRN3Q9UPQ7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
PDZRN3Q9UPQ7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.51■■■□□ 2.64
PDZRN3Q9UPQ7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
PDZRN3Q9UPQ7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PDZRN3Q9UPQ7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.51■■■□□ 2.63
PDZRN3Q9UPQ7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PDZRN3Q9UPQ7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
PDZRN3Q9UPQ7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
PDZRN3Q9UPQ7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PDZRN3Q9UPQ7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
PDZRN3Q9UPQ7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
PDZRN3Q9UPQ7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PDZRN3Q9UPQ7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.49■■■□□ 2.63
PDZRN3Q9UPQ7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.49■■■□□ 2.63
PDZRN3Q9UPQ7 AL451085.2-201ENST00000605085 799 ntBASIC31.49■■■□□ 2.63
PDZRN3Q9UPQ7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
PDZRN3Q9UPQ7 AC074183.2-201ENST00000623112 922 ntBASIC31.48■■■□□ 2.63
PDZRN3Q9UPQ7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.48■■■□□ 2.63
PDZRN3Q9UPQ7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PDZRN3Q9UPQ7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.47■■■□□ 2.63
PDZRN3Q9UPQ7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms