Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HPF1Q9NWY4 AL359504.2-201ENST00000605506 1601 ntBASIC22.65■■□□□ 1.22
HPF1Q9NWY4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
HPF1Q9NWY4 RP9P-202ENST00000450133 1212 ntBASIC22.65■■□□□ 1.22
HPF1Q9NWY4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.65■■□□□ 1.22
HPF1Q9NWY4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HPF1Q9NWY4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HPF1Q9NWY4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HPF1Q9NWY4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HPF1Q9NWY4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
HPF1Q9NWY4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
HPF1Q9NWY4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HPF1Q9NWY4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HPF1Q9NWY4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.64■■□□□ 1.21
HPF1Q9NWY4 AC012354.3-201ENST00000623734 483 ntBASIC22.64■■□□□ 1.21
HPF1Q9NWY4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HPF1Q9NWY4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.63■■□□□ 1.21
HPF1Q9NWY4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.63■■□□□ 1.21
HPF1Q9NWY4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.63■■□□□ 1.21
HPF1Q9NWY4 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.63■■□□□ 1.21
HPF1Q9NWY4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
HPF1Q9NWY4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.63■■□□□ 1.21
HPF1Q9NWY4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
HPF1Q9NWY4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HPF1Q9NWY4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
HPF1Q9NWY4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HPF1Q9NWY4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
HPF1Q9NWY4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
HPF1Q9NWY4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.62■■□□□ 1.21
HPF1Q9NWY4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
HPF1Q9NWY4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HPF1Q9NWY4 AC133552.2-201ENST00000619106 1032 ntBASIC22.62■■□□□ 1.21
HPF1Q9NWY4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.62■■□□□ 1.21
HPF1Q9NWY4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HPF1Q9NWY4 AL449106.1-201ENST00000608517 1980 ntBASIC22.61■■□□□ 1.21
HPF1Q9NWY4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.61■■□□□ 1.21
HPF1Q9NWY4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HPF1Q9NWY4 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.61■■□□□ 1.21
HPF1Q9NWY4 AC093536.1-201ENST00000569153 554 ntBASIC22.61■■□□□ 1.21
HPF1Q9NWY4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
HPF1Q9NWY4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HPF1Q9NWY4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
HPF1Q9NWY4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HPF1Q9NWY4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
HPF1Q9NWY4 AC009831.1-201ENST00000580420 1582 ntBASIC22.6■■□□□ 1.21
HPF1Q9NWY4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
HPF1Q9NWY4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
HPF1Q9NWY4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HPF1Q9NWY4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.6■■□□□ 1.21
HPF1Q9NWY4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
HPF1Q9NWY4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
HPF1Q9NWY4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.59■■□□□ 1.21
HPF1Q9NWY4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HPF1Q9NWY4 KRT18P60-201ENST00000312876 1297 ntBASIC22.59■■□□□ 1.21
HPF1Q9NWY4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
HPF1Q9NWY4 AC026202.3-201ENST00000600805 1127 ntBASIC22.59■■□□□ 1.21
HPF1Q9NWY4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HPF1Q9NWY4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
HPF1Q9NWY4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HPF1Q9NWY4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.58■■□□□ 1.21
HPF1Q9NWY4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
HPF1Q9NWY4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
HPF1Q9NWY4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HPF1Q9NWY4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HPF1Q9NWY4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.57■■□□□ 1.2
HPF1Q9NWY4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
HPF1Q9NWY4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.57■■□□□ 1.2
HPF1Q9NWY4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HPF1Q9NWY4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HPF1Q9NWY4 AL592293.1-201ENST00000502889 1188 ntBASIC22.56■■□□□ 1.2
HPF1Q9NWY4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
HPF1Q9NWY4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
HPF1Q9NWY4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.55■■□□□ 1.2
HPF1Q9NWY4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HPF1Q9NWY4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HPF1Q9NWY4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HPF1Q9NWY4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
HPF1Q9NWY4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HPF1Q9NWY4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
HPF1Q9NWY4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HPF1Q9NWY4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
HPF1Q9NWY4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HPF1Q9NWY4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HPF1Q9NWY4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
HPF1Q9NWY4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HPF1Q9NWY4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
HPF1Q9NWY4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HPF1Q9NWY4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.52■■□□□ 1.2
HPF1Q9NWY4 RAP2CP1-202ENST00000605179 643 ntBASIC22.52■■□□□ 1.2
HPF1Q9NWY4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HPF1Q9NWY4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.52■■□□□ 1.2
HPF1Q9NWY4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HPF1Q9NWY4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HPF1Q9NWY4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HPF1Q9NWY4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HPF1Q9NWY4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.51■■□□□ 1.19
HPF1Q9NWY4 AL033527.3-201ENST00000566366 1196 ntBASIC22.51■■□□□ 1.19
HPF1Q9NWY4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
HPF1Q9NWY4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.51■■□□□ 1.19
HPF1Q9NWY4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms