Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-2Q9C056 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-2Q9C056 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-2Q9C056 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.76■□□□□ 0.75
NKX6-2Q9C056 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NKX6-2Q9C056 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.76■□□□□ 0.75
NKX6-2Q9C056 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-2Q9C056 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.76■□□□□ 0.75
NKX6-2Q9C056 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NKX6-2Q9C056 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX6-2Q9C056 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
NKX6-2Q9C056 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.75■□□□□ 0.75
NKX6-2Q9C056 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX6-2Q9C056 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX6-2Q9C056 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NKX6-2Q9C056 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX6-2Q9C056 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.74■□□□□ 0.75
NKX6-2Q9C056 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX6-2Q9C056 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX6-2Q9C056 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.74■□□□□ 0.75
NKX6-2Q9C056 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX6-2Q9C056 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX6-2Q9C056 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX6-2Q9C056 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NKX6-2Q9C056 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX6-2Q9C056 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX6-2Q9C056 AL024507.2-201ENST00000606070 2574 ntBASIC19.72■□□□□ 0.75
NKX6-2Q9C056 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-2Q9C056 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-2Q9C056 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NKX6-2Q9C056 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-2Q9C056 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-2Q9C056 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NKX6-2Q9C056 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-2Q9C056 AL139125.2-201ENST00000623134 1869 ntBASIC19.71■□□□□ 0.75
NKX6-2Q9C056 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-2Q9C056 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-2Q9C056 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.7■□□□□ 0.74
NKX6-2Q9C056 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-2Q9C056 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-2Q9C056 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NKX6-2Q9C056 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
NKX6-2Q9C056 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-2Q9C056 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-2Q9C056 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX6-2Q9C056 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX6-2Q9C056 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NKX6-2Q9C056 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX6-2Q9C056 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.68■□□□□ 0.74
NKX6-2Q9C056 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-2Q9C056 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NKX6-2Q9C056 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-2Q9C056 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.67■□□□□ 0.74
NKX6-2Q9C056 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-2Q9C056 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-2Q9C056 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-2Q9C056 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.67■□□□□ 0.74
NKX6-2Q9C056 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NKX6-2Q9C056 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NKX6-2Q9C056 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-2Q9C056 AC142381.3-201ENST00000568208 1670 ntBASIC19.67■□□□□ 0.74
NKX6-2Q9C056 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-2Q9C056 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-2Q9C056 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX6-2Q9C056 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX6-2Q9C056 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.66■□□□□ 0.74
NKX6-2Q9C056 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX6-2Q9C056 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX6-2Q9C056 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
NKX6-2Q9C056 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX6-2Q9C056 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.66■□□□□ 0.74
NKX6-2Q9C056 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.65■□□□□ 0.74
NKX6-2Q9C056 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX6-2Q9C056 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NKX6-2Q9C056 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX6-2Q9C056 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NKX6-2Q9C056 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.65■□□□□ 0.74
NKX6-2Q9C056 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
NKX6-2Q9C056 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX6-2Q9C056 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
NKX6-2Q9C056 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
NKX6-2Q9C056 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX6-2Q9C056 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
NKX6-2Q9C056 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
NKX6-2Q9C056 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
NKX6-2Q9C056 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX6-2Q9C056 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX6-2Q9C056 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX6-2Q9C056 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX6-2Q9C056 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NKX6-2Q9C056 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX6-2Q9C056 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX6-2Q9C056 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX6-2Q9C056 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX6-2Q9C056 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX6-2Q9C056 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKX6-2Q9C056 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX6-2Q9C056 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
NKX6-2Q9C056 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX6-2Q9C056 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms