Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSBP3Q9BWW4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SSBP3Q9BWW4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSBP3Q9BWW4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SSBP3Q9BWW4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.42■□□□□ 0.86
SSBP3Q9BWW4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SSBP3Q9BWW4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SSBP3Q9BWW4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SSBP3Q9BWW4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSBP3Q9BWW4 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.41■□□□□ 0.86
SSBP3Q9BWW4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.41■□□□□ 0.86
SSBP3Q9BWW4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.41■□□□□ 0.86
SSBP3Q9BWW4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSBP3Q9BWW4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.41■□□□□ 0.86
SSBP3Q9BWW4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSBP3Q9BWW4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSBP3Q9BWW4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SSBP3Q9BWW4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.4■□□□□ 0.86
SSBP3Q9BWW4 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.4■□□□□ 0.86
SSBP3Q9BWW4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSBP3Q9BWW4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SSBP3Q9BWW4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SSBP3Q9BWW4 AC133552.2-201ENST00000619106 1032 ntBASIC20.4■□□□□ 0.86
SSBP3Q9BWW4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.4■□□□□ 0.86
SSBP3Q9BWW4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SSBP3Q9BWW4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SSBP3Q9BWW4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.39■□□□□ 0.85
SSBP3Q9BWW4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SSBP3Q9BWW4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SSBP3Q9BWW4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SSBP3Q9BWW4 AC093536.1-201ENST00000569153 554 ntBASIC20.39■□□□□ 0.85
SSBP3Q9BWW4 AL449106.1-201ENST00000608517 1980 ntBASIC20.39■□□□□ 0.85
SSBP3Q9BWW4 AC009831.1-201ENST00000580420 1582 ntBASIC20.38■□□□□ 0.85
SSBP3Q9BWW4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSBP3Q9BWW4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSBP3Q9BWW4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SSBP3Q9BWW4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSBP3Q9BWW4 KRT18P60-201ENST00000312876 1297 ntBASIC20.38■□□□□ 0.85
SSBP3Q9BWW4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSBP3Q9BWW4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
SSBP3Q9BWW4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SSBP3Q9BWW4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSBP3Q9BWW4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSBP3Q9BWW4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.38■□□□□ 0.85
SSBP3Q9BWW4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SSBP3Q9BWW4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSBP3Q9BWW4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.37■□□□□ 0.85
SSBP3Q9BWW4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSBP3Q9BWW4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.37■□□□□ 0.85
SSBP3Q9BWW4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.37■□□□□ 0.85
SSBP3Q9BWW4 AC026202.3-201ENST00000600805 1127 ntBASIC20.36■□□□□ 0.85
SSBP3Q9BWW4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SSBP3Q9BWW4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSBP3Q9BWW4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SSBP3Q9BWW4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SSBP3Q9BWW4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.35■□□□□ 0.85
SSBP3Q9BWW4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSBP3Q9BWW4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSBP3Q9BWW4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SSBP3Q9BWW4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
SSBP3Q9BWW4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SSBP3Q9BWW4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.33■□□□□ 0.85
SSBP3Q9BWW4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSBP3Q9BWW4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SSBP3Q9BWW4 AL592293.1-201ENST00000502889 1188 ntBASIC20.33■□□□□ 0.85
SSBP3Q9BWW4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SSBP3Q9BWW4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
SSBP3Q9BWW4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSBP3Q9BWW4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSBP3Q9BWW4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSBP3Q9BWW4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSBP3Q9BWW4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSBP3Q9BWW4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.32■□□□□ 0.84
SSBP3Q9BWW4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SSBP3Q9BWW4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSBP3Q9BWW4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSBP3Q9BWW4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SSBP3Q9BWW4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSBP3Q9BWW4 RAP2CP1-202ENST00000605179 643 ntBASIC20.31■□□□□ 0.84
SSBP3Q9BWW4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
SSBP3Q9BWW4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.31■□□□□ 0.84
SSBP3Q9BWW4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSBP3Q9BWW4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSBP3Q9BWW4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.3■□□□□ 0.84
SSBP3Q9BWW4 AL033527.3-201ENST00000566366 1196 ntBASIC20.3■□□□□ 0.84
SSBP3Q9BWW4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSBP3Q9BWW4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.3■□□□□ 0.84
SSBP3Q9BWW4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.3■□□□□ 0.84
SSBP3Q9BWW4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SSBP3Q9BWW4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSBP3Q9BWW4 TSPY13P-201ENST00000338964 914 ntBASIC20.29■□□□□ 0.84
SSBP3Q9BWW4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSBP3Q9BWW4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SSBP3Q9BWW4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSBP3Q9BWW4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSBP3Q9BWW4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSBP3Q9BWW4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SSBP3Q9BWW4 AC004987.1-201ENST00000428627 508 ntBASIC20.28■□□□□ 0.84
SSBP3Q9BWW4 ATP5G2P3-201ENST00000429083 425 ntBASIC20.28■□□□□ 0.84
SSBP3Q9BWW4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms