Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RETREG2Q8NC44 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.83■■■□□ 2.05
RETREG2Q8NC44 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RETREG2Q8NC44 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
RETREG2Q8NC44 LINC01003-201ENST00000564834 1764 ntBASIC27.82■■■□□ 2.04
RETREG2Q8NC44 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
RETREG2Q8NC44 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
RETREG2Q8NC44 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.81■■■□□ 2.04
RETREG2Q8NC44 AC133552.2-201ENST00000619106 1032 ntBASIC27.81■■■□□ 2.04
RETREG2Q8NC44 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.81■■■□□ 2.04
RETREG2Q8NC44 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.81■■■□□ 2.04
RETREG2Q8NC44 AC129492.7-201ENST00000622992 756 ntBASIC27.81■■■□□ 2.04
RETREG2Q8NC44 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RETREG2Q8NC44 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RETREG2Q8NC44 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
RETREG2Q8NC44 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.8■■■□□ 2.04
RETREG2Q8NC44 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
RETREG2Q8NC44 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RETREG2Q8NC44 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RETREG2Q8NC44 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
RETREG2Q8NC44 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
RETREG2Q8NC44 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
RETREG2Q8NC44 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RETREG2Q8NC44 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RETREG2Q8NC44 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RETREG2Q8NC44 DUX4L18-201ENST00000553347 1267 ntBASIC27.79■■■□□ 2.04
RETREG2Q8NC44 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.78■■■□□ 2.04
RETREG2Q8NC44 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RETREG2Q8NC44 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.78■■■□□ 2.04
RETREG2Q8NC44 AL592293.1-201ENST00000502889 1188 ntBASIC27.78■■■□□ 2.04
RETREG2Q8NC44 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.78■■■□□ 2.04
RETREG2Q8NC44 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.77■■■□□ 2.04
RETREG2Q8NC44 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
RETREG2Q8NC44 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.77■■■□□ 2.04
RETREG2Q8NC44 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.04
RETREG2Q8NC44 SMPD5-203ENST00000639008 1464 ntBASIC27.76■■■□□ 2.04
RETREG2Q8NC44 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RETREG2Q8NC44 AC009831.1-201ENST00000580420 1582 ntBASIC27.76■■■□□ 2.03
RETREG2Q8NC44 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.76■■■□□ 2.03
RETREG2Q8NC44 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RETREG2Q8NC44 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RETREG2Q8NC44 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
RETREG2Q8NC44 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RETREG2Q8NC44 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RETREG2Q8NC44 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RETREG2Q8NC44 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
RETREG2Q8NC44 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RETREG2Q8NC44 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
RETREG2Q8NC44 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.74■■■□□ 2.03
RETREG2Q8NC44 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.74■■■□□ 2.03
RETREG2Q8NC44 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
RETREG2Q8NC44 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
RETREG2Q8NC44 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RETREG2Q8NC44 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RETREG2Q8NC44 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.73■■■□□ 2.03
RETREG2Q8NC44 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
RETREG2Q8NC44 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
RETREG2Q8NC44 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.72■■■□□ 2.03
RETREG2Q8NC44 AL359258.2-201ENST00000564063 1566 ntBASIC27.72■■■□□ 2.03
RETREG2Q8NC44 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
RETREG2Q8NC44 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
RETREG2Q8NC44 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
RETREG2Q8NC44 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
RETREG2Q8NC44 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RETREG2Q8NC44 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RETREG2Q8NC44 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RETREG2Q8NC44 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.69■■■□□ 2.02
RETREG2Q8NC44 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
RETREG2Q8NC44 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.68■■■□□ 2.02
RETREG2Q8NC44 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.68■■■□□ 2.02
RETREG2Q8NC44 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
RETREG2Q8NC44 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.68■■■□□ 2.02
RETREG2Q8NC44 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.67■■■□□ 2.02
RETREG2Q8NC44 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
RETREG2Q8NC44 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RETREG2Q8NC44 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RETREG2Q8NC44 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
RETREG2Q8NC44 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RETREG2Q8NC44 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
RETREG2Q8NC44 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
RETREG2Q8NC44 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
RETREG2Q8NC44 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.66■■■□□ 2.02
RETREG2Q8NC44 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.66■■■□□ 2.02
RETREG2Q8NC44 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RETREG2Q8NC44 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
RETREG2Q8NC44 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.65■■■□□ 2.02
RETREG2Q8NC44 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
RETREG2Q8NC44 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
RETREG2Q8NC44 AC026202.3-201ENST00000600805 1127 ntBASIC27.65■■■□□ 2.02
RETREG2Q8NC44 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RETREG2Q8NC44 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
RETREG2Q8NC44 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
RETREG2Q8NC44 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.64■■■□□ 2.02
RETREG2Q8NC44 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
RETREG2Q8NC44 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
RETREG2Q8NC44 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
RETREG2Q8NC44 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.64■■■□□ 2.02
RETREG2Q8NC44 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.64■■■□□ 2.02
RETREG2Q8NC44 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.64■■■□□ 2.02
RETREG2Q8NC44 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms