Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL27A1Q8IZC6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL27A1Q8IZC6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL27A1Q8IZC6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
COL27A1Q8IZC6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL27A1Q8IZC6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.62■■□□□ 1.37
COL27A1Q8IZC6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL27A1Q8IZC6 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.62■■□□□ 1.37
COL27A1Q8IZC6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.62■■□□□ 1.37
COL27A1Q8IZC6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
COL27A1Q8IZC6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.61■■□□□ 1.37
COL27A1Q8IZC6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.61■■□□□ 1.37
COL27A1Q8IZC6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL27A1Q8IZC6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.61■■□□□ 1.37
COL27A1Q8IZC6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
COL27A1Q8IZC6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
COL27A1Q8IZC6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.6■■□□□ 1.37
COL27A1Q8IZC6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL27A1Q8IZC6 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.6■■□□□ 1.37
COL27A1Q8IZC6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
COL27A1Q8IZC6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.6■■□□□ 1.37
COL27A1Q8IZC6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL27A1Q8IZC6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL27A1Q8IZC6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.6■■□□□ 1.37
COL27A1Q8IZC6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
COL27A1Q8IZC6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL27A1Q8IZC6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL27A1Q8IZC6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
COL27A1Q8IZC6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COL27A1Q8IZC6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
COL27A1Q8IZC6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.58■■□□□ 1.37
COL27A1Q8IZC6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.58■■□□□ 1.37
COL27A1Q8IZC6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.58■■□□□ 1.36
COL27A1Q8IZC6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
COL27A1Q8IZC6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
COL27A1Q8IZC6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL27A1Q8IZC6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
COL27A1Q8IZC6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL27A1Q8IZC6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
COL27A1Q8IZC6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
COL27A1Q8IZC6 BHLHE23-202ENST00000612929 1109 ntBASIC23.56■■□□□ 1.36
COL27A1Q8IZC6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
COL27A1Q8IZC6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
COL27A1Q8IZC6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
COL27A1Q8IZC6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.56■■□□□ 1.36
COL27A1Q8IZC6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.55■■□□□ 1.36
COL27A1Q8IZC6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL27A1Q8IZC6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
COL27A1Q8IZC6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.55■■□□□ 1.36
COL27A1Q8IZC6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
COL27A1Q8IZC6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
COL27A1Q8IZC6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL27A1Q8IZC6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.55■■□□□ 1.36
COL27A1Q8IZC6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COL27A1Q8IZC6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.54■■□□□ 1.36
COL27A1Q8IZC6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL27A1Q8IZC6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL27A1Q8IZC6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.54■■□□□ 1.36
COL27A1Q8IZC6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL27A1Q8IZC6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.53■■□□□ 1.36
COL27A1Q8IZC6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.53■■□□□ 1.36
COL27A1Q8IZC6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL27A1Q8IZC6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL27A1Q8IZC6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL27A1Q8IZC6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL27A1Q8IZC6 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.53■■□□□ 1.36
COL27A1Q8IZC6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
COL27A1Q8IZC6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL27A1Q8IZC6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL27A1Q8IZC6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL27A1Q8IZC6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL27A1Q8IZC6 AC131212.1-201ENST00000613771 668 ntBASIC23.52■■□□□ 1.36
COL27A1Q8IZC6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.52■■□□□ 1.36
COL27A1Q8IZC6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.52■■□□□ 1.35
COL27A1Q8IZC6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL27A1Q8IZC6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL27A1Q8IZC6 AC019069.1-201ENST00000610008 1333 ntBASIC23.51■■□□□ 1.35
COL27A1Q8IZC6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL27A1Q8IZC6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.51■■□□□ 1.35
COL27A1Q8IZC6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.51■■□□□ 1.35
COL27A1Q8IZC6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL27A1Q8IZC6 YBX1P4-201ENST00000392794 808 ntBASIC23.5■■□□□ 1.35
COL27A1Q8IZC6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL27A1Q8IZC6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
COL27A1Q8IZC6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL27A1Q8IZC6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.49■■□□□ 1.35
COL27A1Q8IZC6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL27A1Q8IZC6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL27A1Q8IZC6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL27A1Q8IZC6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL27A1Q8IZC6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL27A1Q8IZC6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.47■■□□□ 1.35
COL27A1Q8IZC6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.47■■□□□ 1.35
COL27A1Q8IZC6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL27A1Q8IZC6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.47■■□□□ 1.35
COL27A1Q8IZC6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
COL27A1Q8IZC6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
COL27A1Q8IZC6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
COL27A1Q8IZC6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.46■■□□□ 1.35
COL27A1Q8IZC6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms