Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 RNF165-205ENST00000588679 2904 ntBASIC18.58■□□□□ 0.56
CDPF1Q6NVV7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDPF1Q6NVV7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDPF1Q6NVV7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.58■□□□□ 0.56
CDPF1Q6NVV7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDPF1Q6NVV7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDPF1Q6NVV7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.57■□□□□ 0.56
CDPF1Q6NVV7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDPF1Q6NVV7 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.57■□□□□ 0.56
CDPF1Q6NVV7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.57■□□□□ 0.56
CDPF1Q6NVV7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC18.57■□□□□ 0.56
CDPF1Q6NVV7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.57■□□□□ 0.56
CDPF1Q6NVV7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.56■□□□□ 0.56
CDPF1Q6NVV7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CDPF1Q6NVV7 DUSP8P4-201ENST00000399538 1761 ntBASIC18.56■□□□□ 0.56
CDPF1Q6NVV7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDPF1Q6NVV7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDPF1Q6NVV7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.56■□□□□ 0.56
CDPF1Q6NVV7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDPF1Q6NVV7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.56■□□□□ 0.56
CDPF1Q6NVV7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.56■□□□□ 0.56
CDPF1Q6NVV7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDPF1Q6NVV7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDPF1Q6NVV7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDPF1Q6NVV7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CDPF1Q6NVV7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDPF1Q6NVV7 AC136428.2-201ENST00000563187 214 ntBASIC18.54■□□□□ 0.56
CDPF1Q6NVV7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.54■□□□□ 0.56
CDPF1Q6NVV7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDPF1Q6NVV7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CDPF1Q6NVV7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CDPF1Q6NVV7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDPF1Q6NVV7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CDPF1Q6NVV7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.53■□□□□ 0.56
CDPF1Q6NVV7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDPF1Q6NVV7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.53■□□□□ 0.56
CDPF1Q6NVV7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDPF1Q6NVV7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.53■□□□□ 0.56
CDPF1Q6NVV7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CDPF1Q6NVV7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.52■□□□□ 0.56
CDPF1Q6NVV7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDPF1Q6NVV7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDPF1Q6NVV7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
CDPF1Q6NVV7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDPF1Q6NVV7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDPF1Q6NVV7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDPF1Q6NVV7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDPF1Q6NVV7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDPF1Q6NVV7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDPF1Q6NVV7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDPF1Q6NVV7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDPF1Q6NVV7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.5■□□□□ 0.55
CDPF1Q6NVV7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.49■□□□□ 0.55
CDPF1Q6NVV7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.49■□□□□ 0.55
CDPF1Q6NVV7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDPF1Q6NVV7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDPF1Q6NVV7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDPF1Q6NVV7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDPF1Q6NVV7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDPF1Q6NVV7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDPF1Q6NVV7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDPF1Q6NVV7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDPF1Q6NVV7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.48■□□□□ 0.55
CDPF1Q6NVV7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDPF1Q6NVV7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CDPF1Q6NVV7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDPF1Q6NVV7 AL139125.2-201ENST00000623134 1869 ntBASIC18.47■□□□□ 0.55
CDPF1Q6NVV7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDPF1Q6NVV7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.47■□□□□ 0.55
CDPF1Q6NVV7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.46■□□□□ 0.55
CDPF1Q6NVV7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDPF1Q6NVV7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDPF1Q6NVV7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CDPF1Q6NVV7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CDPF1Q6NVV7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDPF1Q6NVV7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CDPF1Q6NVV7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDPF1Q6NVV7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDPF1Q6NVV7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDPF1Q6NVV7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDPF1Q6NVV7 SUZ12P1-203ENST00000578195 985 ntBASIC18.44■□□□□ 0.54
CDPF1Q6NVV7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.44■□□□□ 0.54
CDPF1Q6NVV7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CDPF1Q6NVV7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDPF1Q6NVV7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CDPF1Q6NVV7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDPF1Q6NVV7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDPF1Q6NVV7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.43■□□□□ 0.54
CDPF1Q6NVV7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.43■□□□□ 0.54
CDPF1Q6NVV7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.43■□□□□ 0.54
CDPF1Q6NVV7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.43■□□□□ 0.54
CDPF1Q6NVV7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CDPF1Q6NVV7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDPF1Q6NVV7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDPF1Q6NVV7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDPF1Q6NVV7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CDPF1Q6NVV7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CDPF1Q6NVV7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDPF1Q6NVV7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDPF1Q6NVV7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms