Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDKAL1Q5VV42 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.94■■□□□ 1.9
CDKAL1Q5VV42 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDKAL1Q5VV42 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.94■■□□□ 1.9
CDKAL1Q5VV42 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDKAL1Q5VV42 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.93■■□□□ 1.9
CDKAL1Q5VV42 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CDKAL1Q5VV42 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.93■■□□□ 1.9
CDKAL1Q5VV42 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDKAL1Q5VV42 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDKAL1Q5VV42 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDKAL1Q5VV42 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDKAL1Q5VV42 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CDKAL1Q5VV42 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.92■■□□□ 1.9
CDKAL1Q5VV42 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CDKAL1Q5VV42 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
CDKAL1Q5VV42 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CDKAL1Q5VV42 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.91■■□□□ 1.9
CDKAL1Q5VV42 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDKAL1Q5VV42 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CDKAL1Q5VV42 DUX4L13-201ENST00000554103 1267 ntBASIC26.91■■□□□ 1.9
CDKAL1Q5VV42 DUX4L15-201ENST00000611059 1267 ntBASIC26.91■■□□□ 1.9
CDKAL1Q5VV42 DUX4L23-201ENST00000615195 1269 ntBASIC26.91■■□□□ 1.9
CDKAL1Q5VV42 DUX4L24-201ENST00000617576 1269 ntBASIC26.91■■□□□ 1.9
CDKAL1Q5VV42 DUX4L22-201ENST00000618238 1269 ntBASIC26.91■■□□□ 1.9
CDKAL1Q5VV42 DUX4L20-201ENST00000619712 1269 ntBASIC26.91■■□□□ 1.9
CDKAL1Q5VV42 DUX4L21-201ENST00000622058 1269 ntBASIC26.91■■□□□ 1.9
CDKAL1Q5VV42 DUX4L10-201ENST00000622460 1267 ntBASIC26.91■■□□□ 1.9
CDKAL1Q5VV42 DUX4L25-201ENST00000624915 1269 ntBASIC26.91■■□□□ 1.9
CDKAL1Q5VV42 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
CDKAL1Q5VV42 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDKAL1Q5VV42 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDKAL1Q5VV42 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
CDKAL1Q5VV42 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDKAL1Q5VV42 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.9■■□□□ 1.9
CDKAL1Q5VV42 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CDKAL1Q5VV42 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
CDKAL1Q5VV42 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CDKAL1Q5VV42 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CDKAL1Q5VV42 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CDKAL1Q5VV42 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
CDKAL1Q5VV42 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDKAL1Q5VV42 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.88■■□□□ 1.89
CDKAL1Q5VV42 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDKAL1Q5VV42 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDKAL1Q5VV42 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
CDKAL1Q5VV42 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
CDKAL1Q5VV42 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
CDKAL1Q5VV42 RPS2P35-201ENST00000443417 897 ntBASIC26.87■■□□□ 1.89
CDKAL1Q5VV42 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
CDKAL1Q5VV42 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDKAL1Q5VV42 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.86■■□□□ 1.89
CDKAL1Q5VV42 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.86■■□□□ 1.89
CDKAL1Q5VV42 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.86■■□□□ 1.89
CDKAL1Q5VV42 MIR219A2-201ENST00000608502 1504 ntBASIC26.85■■□□□ 1.89
CDKAL1Q5VV42 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CDKAL1Q5VV42 AC148477.6-201ENST00000623746 465 ntBASIC26.85■■□□□ 1.89
CDKAL1Q5VV42 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CDKAL1Q5VV42 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDKAL1Q5VV42 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDKAL1Q5VV42 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
CDKAL1Q5VV42 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDKAL1Q5VV42 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDKAL1Q5VV42 AC008813.1-201ENST00000536597 885 ntBASIC26.84■■□□□ 1.89
CDKAL1Q5VV42 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.84■■□□□ 1.89
CDKAL1Q5VV42 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDKAL1Q5VV42 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDKAL1Q5VV42 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDKAL1Q5VV42 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CDKAL1Q5VV42 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
CDKAL1Q5VV42 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.83■■□□□ 1.89
CDKAL1Q5VV42 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
CDKAL1Q5VV42 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CDKAL1Q5VV42 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDKAL1Q5VV42 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.83■■□□□ 1.89
CDKAL1Q5VV42 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDKAL1Q5VV42 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDKAL1Q5VV42 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.82■■□□□ 1.88
CDKAL1Q5VV42 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.82■■□□□ 1.88
CDKAL1Q5VV42 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.82■■□□□ 1.88
CDKAL1Q5VV42 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
CDKAL1Q5VV42 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CDKAL1Q5VV42 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDKAL1Q5VV42 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDKAL1Q5VV42 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CDKAL1Q5VV42 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDKAL1Q5VV42 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDKAL1Q5VV42 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDKAL1Q5VV42 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.8■■□□□ 1.88
CDKAL1Q5VV42 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.8■■□□□ 1.88
CDKAL1Q5VV42 DUX4L11-201ENST00000611504 1267 ntBASIC26.8■■□□□ 1.88
CDKAL1Q5VV42 DUX4L12-201ENST00000614593 1267 ntBASIC26.8■■□□□ 1.88
CDKAL1Q5VV42 DUX4L14-201ENST00000621227 1267 ntBASIC26.8■■□□□ 1.88
CDKAL1Q5VV42 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CDKAL1Q5VV42 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDKAL1Q5VV42 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.79■■□□□ 1.88
CDKAL1Q5VV42 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDKAL1Q5VV42 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDKAL1Q5VV42 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.78■■□□□ 1.88
CDKAL1Q5VV42 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.78■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms