Protein–RNA interactions for Protein: P47024

TY4B-J, Transposon Ty4-J Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,803 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-JP47024 tG(GCC)D1tG(GCC)D1 71 nt8.4□□□□□ -1.07
TY4B-JP47024 tG(GCC)D2tG(GCC)D2 71 nt8.4□□□□□ -1.07
TY4B-JP47024 tG(GCC)EtG(GCC)E 71 nt8.4□□□□□ -1.07
TY4B-JP47024 SUF20tG(GCC)F1 71 nt8.4□□□□□ -1.07
TY4B-JP47024 tG(GCC)F2tG(GCC)F2 71 nt8.4□□□□□ -1.07
TY4B-JP47024 tG(GCC)G1tG(GCC)G1 71 nt8.4□□□□□ -1.07
TY4B-JP47024 tG(GCC)G2tG(GCC)G2 71 nt8.4□□□□□ -1.07
TY4B-JP47024 tG(GCC)J1tG(GCC)J1 71 nt8.4□□□□□ -1.07
TY4B-JP47024 SUF23tG(GCC)J2 71 nt8.4□□□□□ -1.07
TY4B-JP47024 tG(GCC)MtG(GCC)M 71 nt8.4□□□□□ -1.07
TY4B-JP47024 tG(GCC)O1tG(GCC)O1 71 nt8.4□□□□□ -1.07
TY4B-JP47024 SUF17tG(GCC)O2 71 nt8.4□□□□□ -1.07
TY4B-JP47024 tG(GCC)P1tG(GCC)P1 71 nt8.4□□□□□ -1.07
TY4B-JP47024 tG(GCC)P2tG(GCC)P2 71 nt8.4□□□□□ -1.07
TY4B-JP47024 FLC2YAL053W 2352 nt8.39□□□□□ -1.07
TY4B-JP47024 DOT5YIL010W 648 nt8.38□□□□□ -1.07
TY4B-JP47024 TUF1YOR187W 1314 nt8.38□□□□□ -1.07
TY4B-JP47024 MAL31YBR298C 1845 nt8.38□□□□□ -1.07
TY4B-JP47024 TIM22YDL217C 624 nt8.38□□□□□ -1.07
TY4B-JP47024 MRPS28YDR337W 861 nt8.38□□□□□ -1.07
TY4B-JP47024 MIX17YMR002W 471 nt8.38□□□□□ -1.07
TY4B-JP47024 YNL200CYNL200C 741 nt8.38□□□□□ -1.07
TY4B-JP47024 ENB1YOL158C 1821 nt8.38□□□□□ -1.07
TY4B-JP47024 YET3YDL072C 612 nt8.37□□□□□ -1.07
TY4B-JP47024 SRL2YLR082C 1179 nt8.37□□□□□ -1.07
TY4B-JP47024 AMD2YDR242W 1650 nt8.37□□□□□ -1.07
TY4B-JP47024 MET2YNL277W 1461 nt8.36□□□□□ -1.07
TY4B-JP47024 UTP4YDR324C 2331 nt8.36□□□□□ -1.07
TY4B-JP47024 MAK31YCR020C-A 267 nt8.36□□□□□ -1.07
TY4B-JP47024 MRPL28YDR462W 444 nt8.36□□□□□ -1.07
TY4B-JP47024 GLC8YMR311C 690 nt8.36□□□□□ -1.07
TY4B-JP47024 RPN11YFR004W 921 nt8.36□□□□□ -1.07
TY4B-JP47024 ATG36YJL185C 882 nt8.36□□□□□ -1.07
TY4B-JP47024 TSR3YOR006C 942 nt8.36□□□□□ -1.07
TY4B-JP47024 MDL2YPL270W 2322 nt8.35□□□□□ -1.07
TY4B-JP47024 POX1YGL205W 2247 nt8.35□□□□□ -1.07
TY4B-JP47024 TMA46YOR091W 1038 nt8.35□□□□□ -1.07
TY4B-JP47024 BUD32YGR262C 786 nt8.34□□□□□ -1.07
TY4B-JP47024 ELA1YNL230C 1140 nt8.34□□□□□ -1.07
TY4B-JP47024 PAC2YER007W 1557 nt8.34□□□□□ -1.07
TY4B-JP47024 RMD8YFR048W 1989 nt8.33□□□□□ -1.08
TY4B-JP47024 DFR1YOR236W 636 nt8.32□□□□□ -1.08
TY4B-JP47024 FRA1YLL029W 2250 nt8.32□□□□□ -1.08
TY4B-JP47024 AAT2YLR027C 1257 nt8.31□□□□□ -1.08
TY4B-JP47024 SNT309YPR101W 528 nt8.3□□□□□ -1.08
TY4B-JP47024 YFL013W-AYFL013W-A 804 nt8.29□□□□□ -1.08
TY4B-JP47024 RPP1YHR062C 882 nt8.29□□□□□ -1.08
TY4B-JP47024 RPE1YJL121C 717 nt8.29□□□□□ -1.08
TY4B-JP47024 YJR146WYJR146W 354 nt8.29□□□□□ -1.08
TY4B-JP47024 CTF19YPL018W 1110 nt8.29□□□□□ -1.08
TY4B-JP47024 YPL264CYPL264C 1062 nt8.29□□□□□ -1.08
TY4B-JP47024 CAN1YEL063C 1773 nt8.29□□□□□ -1.08
TY4B-JP47024 CCC2YDR270W 3015 nt8.29□□□□□ -1.08
TY4B-JP47024 MLS1YNL117W 1665 nt8.28□□□□□ -1.08
TY4B-JP47024 RPL10YLR075W 666 nt8.27□□□□□ -1.09
TY4B-JP47024 RUF23RUF23 254 nt8.27□□□□□ -1.09
TY4B-JP47024 HXT9YJL219W 1704 nt8.27□□□□□ -1.09
TY4B-JP47024 GTO3YMR251W 1101 nt8.26□□□□□ -1.09
TY4B-JP47024 RFC4YOL094C 972 nt8.26□□□□□ -1.09
TY4B-JP47024 TOK1YJL093C 2076 nt8.26□□□□□ -1.09
TY4B-JP47024 UFD1YGR048W 1086 nt8.25□□□□□ -1.09
TY4B-JP47024 YJR084WYJR084W 1272 nt8.24□□□□□ -1.09
TY4B-JP47024 COX10YPL172C 1389 nt8.24□□□□□ -1.09
TY4B-JP47024 YLR112WYLR112W 420 nt8.24□□□□□ -1.09
TY4B-JP47024 YNL042W-BYNL042W-B 258 nt8.24□□□□□ -1.09
TY4B-JP47024 HRQ1YDR291W 3234 nt8.24□□□□□ -1.09
TY4B-JP47024 EDE1YBL047C 4146 nt8.24□□□□□ -1.09
TY4B-JP47024 YBR241CYBR241C 1467 nt8.23□□□□□ -1.09
TY4B-JP47024 CDC19YAL038W 1503 nt8.23□□□□□ -1.09
TY4B-JP47024 MTR3YGR158C 753 nt8.23□□□□□ -1.09
TY4B-JP47024 RPS5YJR123W 678 nt8.23□□□□□ -1.09
TY4B-JP47024 YCR041WYCR041W 333 nt8.22□□□□□ -1.09
TY4B-JP47024 SNF4YGL115W 969 nt8.22□□□□□ -1.09
TY4B-JP47024 ISN1YOR155C 1353 nt8.22□□□□□ -1.09
TY4B-JP47024 NUP84YDL116W 2181 nt8.22□□□□□ -1.09
TY4B-JP47024 RSC30YHR056C 2652 nt8.22□□□□□ -1.09
TY4B-JP47024 SPE4YLR146C 903 nt8.22□□□□□ -1.09
TY4B-JP47024 LDB16YCL005W 771 nt8.22□□□□□ -1.09
TY4B-JP47024 CRF1YDR223W 1404 nt8.21□□□□□ -1.09
TY4B-JP47024 SKS1YPL026C 1509 nt8.21□□□□□ -1.09
TY4B-JP47024 RDN5-2RDN5-2 119 nt8.21□□□□□ -1.1
TY4B-JP47024 RDN5-3RDN5-3 119 nt8.21□□□□□ -1.1
TY4B-JP47024 RDN5-4RDN5-4 119 nt8.21□□□□□ -1.1
TY4B-JP47024 RDN5-5RDN5-5 119 nt8.21□□□□□ -1.1
TY4B-JP47024 MRPS12YNR036C 462 nt8.21□□□□□ -1.1
TY4B-JP47024 RFS1YBR052C 633 nt8.21□□□□□ -1.1
TY4B-JP47024 YLR312CYLR312C 1197 nt8.2□□□□□ -1.1
TY4B-JP47024 CCT3YJL014W 1605 nt8.2□□□□□ -1.1
TY4B-JP47024 AMN1YBR158W 1650 nt8.2□□□□□ -1.1
TY4B-JP47024 PPT1YGR123C 1542 nt8.19□□□□□ -1.1
TY4B-JP47024 CAF40YNL288W 1122 nt8.19□□□□□ -1.1
TY4B-JP47024 ICL1YER065C 1674 nt8.18□□□□□ -1.1
TY4B-JP47024 ADY2YCR010C 852 nt8.18□□□□□ -1.1
TY4B-JP47024 YJR154WYJR154W 1041 nt8.18□□□□□ -1.1
TY4B-JP47024 TOD6YBL054W 1578 nt8.18□□□□□ -1.1
TY4B-JP47024 PRC1YMR297W 1599 nt8.17□□□□□ -1.1
TY4B-JP47024 JNM1YMR294W 1122 nt8.17□□□□□ -1.1
TY4B-JP47024 ADE17YMR120C 1779 nt8.16□□□□□ -1.1
TY4B-JP47024 ILV1YER086W 1731 nt8.16□□□□□ -1.1
TY4B-JP47024 LOT6YLR011W 576 nt8.16□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 21.5 ms