Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCAF4O95104 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCAF4O95104 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCAF4O95104 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCAF4O95104 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCAF4O95104 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCAF4O95104 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.83■□□□□ 0.77
SCAF4O95104 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCAF4O95104 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.83■□□□□ 0.76
SCAF4O95104 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SCAF4O95104 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCAF4O95104 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SCAF4O95104 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCAF4O95104 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SCAF4O95104 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.82■□□□□ 0.76
SCAF4O95104 AC108673.1-201ENST00000510422 1159 ntBASIC19.82■□□□□ 0.76
SCAF4O95104 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.82■□□□□ 0.76
SCAF4O95104 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
SCAF4O95104 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCAF4O95104 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCAF4O95104 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCAF4O95104 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCAF4O95104 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCAF4O95104 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCAF4O95104 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SCAF4O95104 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.81■□□□□ 0.76
SCAF4O95104 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCAF4O95104 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCAF4O95104 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCAF4O95104 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCAF4O95104 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCAF4O95104 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SCAF4O95104 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCAF4O95104 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.8■□□□□ 0.76
SCAF4O95104 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
SCAF4O95104 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SCAF4O95104 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.8■□□□□ 0.76
SCAF4O95104 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCAF4O95104 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCAF4O95104 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.8■□□□□ 0.76
SCAF4O95104 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCAF4O95104 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCAF4O95104 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCAF4O95104 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCAF4O95104 MIR6090-201ENST00000622481 60 ntBASIC19.79■□□□□ 0.76
SCAF4O95104 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCAF4O95104 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCAF4O95104 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCAF4O95104 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCAF4O95104 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.78■□□□□ 0.76
SCAF4O95104 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.78■□□□□ 0.76
SCAF4O95104 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SCAF4O95104 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCAF4O95104 AP004609.3-201ENST00000610705 1884 ntBASIC19.77■□□□□ 0.76
SCAF4O95104 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCAF4O95104 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCAF4O95104 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCAF4O95104 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCAF4O95104 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SCAF4O95104 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCAF4O95104 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.76■□□□□ 0.75
SCAF4O95104 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCAF4O95104 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCAF4O95104 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.76■□□□□ 0.75
SCAF4O95104 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.76■□□□□ 0.75
SCAF4O95104 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SCAF4O95104 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCAF4O95104 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.75■□□□□ 0.75
SCAF4O95104 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.75■□□□□ 0.75
SCAF4O95104 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SCAF4O95104 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.75■□□□□ 0.75
SCAF4O95104 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCAF4O95104 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCAF4O95104 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCAF4O95104 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCAF4O95104 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SCAF4O95104 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCAF4O95104 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCAF4O95104 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCAF4O95104 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCAF4O95104 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCAF4O95104 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SCAF4O95104 AC142472.1-201ENST00000612013 1741 ntBASIC19.72■□□□□ 0.75
SCAF4O95104 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.72■□□□□ 0.75
SCAF4O95104 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SCAF4O95104 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SCAF4O95104 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.71■□□□□ 0.75
SCAF4O95104 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.71■□□□□ 0.75
SCAF4O95104 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.71■□□□□ 0.75
SCAF4O95104 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCAF4O95104 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCAF4O95104 WHAMMP2-203ENST00000563942 1603 ntBASIC19.71■□□□□ 0.75
SCAF4O95104 LINC00273-201ENST00000539813 1452 ntBASIC19.71■□□□□ 0.75
SCAF4O95104 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCAF4O95104 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.71■□□□□ 0.75
SCAF4O95104 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCAF4O95104 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCAF4O95104 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCAF4O95104 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCAF4O95104 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms