Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC27.76■■■□□ 2.03
TNRC18O15417 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC27.76■■■□□ 2.03
TNRC18O15417 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.76■■■□□ 2.03
TNRC18O15417 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.75■■■□□ 2.03
TNRC18O15417 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
TNRC18O15417 ANKRD20A6P-201ENST00000618763 204 ntBASIC27.75■■■□□ 2.03
TNRC18O15417 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC27.75■■■□□ 2.03
TNRC18O15417 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
TNRC18O15417 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.74■■■□□ 2.03
TNRC18O15417 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
TNRC18O15417 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC27.74■■■□□ 2.03
TNRC18O15417 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC27.73■■■□□ 2.03
TNRC18O15417 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
TNRC18O15417 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.73■■■□□ 2.03
TNRC18O15417 ESRRAP2-201ENST00000418437 1549 ntBASIC27.73■■■□□ 2.03
TNRC18O15417 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC27.72■■■□□ 2.03
TNRC18O15417 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC27.72■■■□□ 2.03
TNRC18O15417 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TNRC18O15417 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
TNRC18O15417 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
TNRC18O15417 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
TNRC18O15417 AC127502.1-201ENST00000399971 1502 ntBASIC27.71■■■□□ 2.03
TNRC18O15417 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
TNRC18O15417 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
TNRC18O15417 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC27.71■■■□□ 2.03
TNRC18O15417 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TNRC18O15417 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
TNRC18O15417 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
TNRC18O15417 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
TNRC18O15417 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27.69■■■□□ 2.02
TNRC18O15417 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TNRC18O15417 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TNRC18O15417 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
TNRC18O15417 PARL-206ENST00000435888 1098 ntTSL 5 BASIC27.69■■■□□ 2.02
TNRC18O15417 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.69■■■□□ 2.02
TNRC18O15417 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TNRC18O15417 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC27.68■■■□□ 2.02
TNRC18O15417 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC27.68■■■□□ 2.02
TNRC18O15417 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC27.68■■■□□ 2.02
TNRC18O15417 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TNRC18O15417 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC27.67■■■□□ 2.02
TNRC18O15417 AL117332.1-201ENST00000622628 974 ntBASIC27.67■■■□□ 2.02
TNRC18O15417 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
TNRC18O15417 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
TNRC18O15417 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
TNRC18O15417 AL162430.1-201ENST00000480705 870 ntBASIC27.66■■■□□ 2.02
TNRC18O15417 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
TNRC18O15417 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
TNRC18O15417 AC106739.1-201ENST00000617035 715 ntBASIC27.66■■■□□ 2.02
TNRC18O15417 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
TNRC18O15417 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TNRC18O15417 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC27.65■■■□□ 2.02
TNRC18O15417 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC27.65■■■□□ 2.02
TNRC18O15417 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.65■■■□□ 2.02
TNRC18O15417 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.65■■■□□ 2.02
TNRC18O15417 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
TNRC18O15417 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TNRC18O15417 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
TNRC18O15417 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC27.63■■■□□ 2.01
TNRC18O15417 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.63■■■□□ 2.01
TNRC18O15417 RARRES2P11-201ENST00000635158 484 ntBASIC27.63■■■□□ 2.01
TNRC18O15417 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
TNRC18O15417 AC087623.3-201ENST00000607047 1098 ntBASIC27.63■■■□□ 2.01
TNRC18O15417 MIR6821-201ENST00000617625 74 ntBASIC27.63■■■□□ 2.01
TNRC18O15417 TSPY9P-201ENST00000440215 945 ntBASIC27.62■■■□□ 2.01
TNRC18O15417 TSPY11P-201ENST00000442607 1045 ntBASIC27.62■■■□□ 2.01
TNRC18O15417 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC27.62■■■□□ 2.01
TNRC18O15417 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC27.62■■■□□ 2.01
TNRC18O15417 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
TNRC18O15417 AL161658.1-201ENST00000623641 1967 ntBASIC27.62■■■□□ 2.01
TNRC18O15417 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC27.62■■■□□ 2.01
TNRC18O15417 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.61■■■□□ 2.01
TNRC18O15417 AL031432.3-201ENST00000607698 485 ntBASIC27.61■■■□□ 2.01
TNRC18O15417 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.61■■■□□ 2.01
TNRC18O15417 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.6■■■□□ 2.01
TNRC18O15417 AL359258.2-201ENST00000564063 1566 ntBASIC27.6■■■□□ 2.01
TNRC18O15417 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC27.6■■■□□ 2.01
TNRC18O15417 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
TNRC18O15417 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
TNRC18O15417 AC142381.2-201ENST00000566120 298 ntBASIC27.6■■■□□ 2.01
TNRC18O15417 AL512631.2-201ENST00000604634 923 ntBASIC27.59■■■□□ 2.01
TNRC18O15417 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC27.58■■■□□ 2.01
TNRC18O15417 MIR3960-201ENST00000583311 91 ntBASIC27.58■■■□□ 2.01
TNRC18O15417 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
TNRC18O15417 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TNRC18O15417 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.57■■■□□ 2
TNRC18O15417 AC097381.1-201ENST00000429019 1296 ntBASIC27.57■■■□□ 2
TNRC18O15417 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
TNRC18O15417 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC27.56■■■□□ 2
TNRC18O15417 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TNRC18O15417 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC27.55■■■□□ 2
TNRC18O15417 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.55■■■□□ 2
TNRC18O15417 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TNRC18O15417 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.54■■■□□ 2
TNRC18O15417 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TNRC18O15417 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC27.54■■■□□ 2
TNRC18O15417 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TNRC18O15417 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.53■■■□□ 2
TNRC18O15417 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
TNRC18O15417 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.53■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms