Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.17■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 DUX4L13-201ENST00000554103 1267 ntBASIC17.17■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 DUX4L15-201ENST00000611059 1267 ntBASIC17.17■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 DUX4L23-201ENST00000615195 1269 ntBASIC17.17■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 DUX4L24-201ENST00000617576 1269 ntBASIC17.17■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 DUX4L22-201ENST00000618238 1269 ntBASIC17.17■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 DUX4L20-201ENST00000619712 1269 ntBASIC17.17■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 DUX4L21-201ENST00000622058 1269 ntBASIC17.17■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 DUX4L10-201ENST00000622460 1267 ntBASIC17.17■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 DUX4L25-201ENST00000624915 1269 ntBASIC17.17■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.15■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 AP002414.2-202ENST00000590929 1450 ntBASIC17.13■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 AC093323.1-202ENST00000635031 2045 ntBASIC17.11■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 AC110285.7-201ENST00000624417 1536 ntBASIC17.1■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.08■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.08■□□□□ 0.33
TRAV8-3A0A0A6YYJ7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.08■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV8-3A0A0A6YYJ7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms