Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.221e-9■□□□□ 9.5
SRSF1Q07955 EHBP1-220ENST00000496857 1262 ntTSL 1 (best)10.09□□□□□ -0.798e-7■□□□□ 9.5
SRSF1Q07955 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.188e-7■□□□□ 9.5
SRSF1Q07955 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC5.92□□□□□ -1.468e-7■□□□□ 9.5
SRSF1Q07955 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.678e-7■□□□□ 9.5
SRSF1Q07955 EIF3D-209ENST00000462641 887 ntTSL 211.03□□□□□ -0.644e-12■□□□□ 9.5
SRSF1Q07955 EIF3D-201ENST00000216190 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.924e-12■□□□□ 9.5
SRSF1Q07955 EIF3D-203ENST00000405442 1851 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.964e-12■□□□□ 9.5
SRSF1Q07955 EIF3D-211ENST00000478547 452 ntTSL 36.96□□□□□ -1.34e-12■□□□□ 9.5
SRSF1Q07955 NOTUM-203ENST00000477214 813 ntTSL 522.91■■□□□ 1.262e-12■□□□□ 9.5
SRSF1Q07955 ZC3H15-209ENST00000498757 881 ntTSL 26.62□□□□□ -1.351e-6■□□□□ 9.5
SRSF1Q07955 ZC3H15-204ENST00000445547 776 ntTSL 25.07□□□□□ -1.61e-6■□□□□ 9.5
SRSF1Q07955 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.17□□□□□ -0.629e-7■□□□□ 9.5
SRSF1Q07955 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.869e-7■□□□□ 9.5
SRSF1Q07955 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.869e-7■□□□□ 9.5
SRSF1Q07955 P4HA1-202ENST00000307116 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.969e-7■□□□□ 9.5
SRSF1Q07955 P4HA1-203ENST00000373008 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.969e-7■□□□□ 9.5
SRSF1Q07955 LUC7L2-204ENST00000456182 2411 ntTSL 1 (best)14.75□□□□□ -0.059e-8■□□□□ 9.5
SRSF1Q07955 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.17□□□□□ -0.149e-8■□□□□ 9.5
SRSF1Q07955 LUC7L2-209ENST00000608368 551 ntTSL 413.98□□□□□ -0.179e-8■□□□□ 9.5
SRSF1Q07955 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.29e-8■□□□□ 9.5
SRSF1Q07955 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC12.57□□□□□ -0.49e-8■□□□□ 9.5
SRSF1Q07955 C7orf55-LUC7L2-201ENST00000541515 1661 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.29e-8■□□□□ 9.5
SRSF1Q07955 PTPN18-213ENST00000489215 460 ntTSL 422.34■■□□□ 1.172e-7■□□□□ 9.5
SRSF1Q07955 ANKHD1-220ENST00000511151 1216 ntTSL 320.63■□□□□ 0.892e-7■□□□□ 9.5
SRSF1Q07955 PTPN18-205ENST00000428843 785 ntTSL 320.1■□□□□ 0.812e-7■□□□□ 9.5
SRSF1Q07955 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.62■□□□□ 0.252e-7■□□□□ 9.5
SRSF1Q07955 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.282e-7■□□□□ 9.5
SRSF1Q07955 LDAH-203ENST00000402479 493 ntTSL 312.96□□□□□ -0.332e-7■□□□□ 9.5
SRSF1Q07955 LDAH-205ENST00000412261 566 ntTSL 412.52□□□□□ -0.412e-7■□□□□ 9.5
SRSF1Q07955 LDAH-213ENST00000626491 1179 ntTSL 2 BASIC11□□□□□ -0.652e-7■□□□□ 9.5
SRSF1Q07955 LDAH-204ENST00000403006 1895 ntTSL 5 BASIC10.75□□□□□ -0.692e-7■□□□□ 9.5
SRSF1Q07955 LDAH-207ENST00000432947 548 ntTSL 410.31□□□□□ -0.762e-7■□□□□ 9.5
SRSF1Q07955 LDAH-202ENST00000381090 2045 ntTSL 5 BASIC9.69□□□□□ -0.862e-7■□□□□ 9.5
SRSF1Q07955 LDAH-206ENST00000419825 826 ntTSL 3 BASIC9.02□□□□□ -0.972e-7■□□□□ 9.5
SRSF1Q07955 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.262e-7■□□□□ 9.5
SRSF1Q07955 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC6.28□□□□□ -1.42e-7■□□□□ 9.5
SRSF1Q07955 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC6.23□□□□□ -1.412e-7■□□□□ 9.5
SRSF1Q07955 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.24□□□□□ -1.572e-7■□□□□ 9.5
SRSF1Q07955 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.13□□□□□ -1.752e-7■□□□□ 9.5
SRSF1Q07955 MLXIPL-211ENST00000488212 534 ntTSL 29.53□□□□□ -0.882e-8■□□□□ 9.5
SRSF1Q07955 FASTK-205ENST00000461979 720 ntTSL 519.83■□□□□ 0.771e-8■□□□□ 9.5
SRSF1Q07955 FASTK-211ENST00000478883 706 ntTSL 316.87■□□□□ 0.291e-8■□□□□ 9.5
SRSF1Q07955 FASTK-210ENST00000478477 826 ntTSL 314.43□□□□□ -0.11e-8■□□□□ 9.5
SRSF1Q07955 HMGN2-202ENST00000460563 1045 ntTSL 510.67□□□□□ -0.78e-7■□□□□ 9.5
SRSF1Q07955 HMGN2-204ENST00000464888 565 ntTSL 210.08□□□□□ -0.88e-7■□□□□ 9.5
SRSF1Q07955 HMGN2-203ENST00000463817 853 ntTSL 27.9□□□□□ -1.148e-7■□□□□ 9.5
SRSF1Q07955 HMGN2-208ENST00000479815 1030 ntTSL 57.4□□□□□ -1.228e-7■□□□□ 9.5
SRSF1Q07955 HMGN2-206ENST00000467700 932 ntTSL 26.73□□□□□ -1.338e-7■□□□□ 9.5
SRSF1Q07955 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.388e-7■□□□□ 9.5
SRSF1Q07955 HMGN2-207ENST00000468388 320 ntTSL 36.46□□□□□ -1.388e-7■□□□□ 9.5
SRSF1Q07955 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.618e-7■□□□□ 9.5
SRSF1Q07955 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.395e-7■□□□□ 9.5
SRSF1Q07955 COQ4-202ENST00000372875 928 ntTSL 2 BASIC11.61□□□□□ -0.555e-7■□□□□ 9.5
SRSF1Q07955 FAR2P4-202ENST00000425399 584 ntBASIC5.69□□□□□ -1.52e-6■□□□□ 9.5
SRSF1Q07955 PSME2-218ENST00000630027 185 ntTSL 3 BASIC13.08□□□□□ -0.327e-14■□□□□ 9.4
SRSF1Q07955 PSME2-214ENST00000560592 760 ntTSL 213.08□□□□□ -0.327e-14■□□□□ 9.4
SRSF1Q07955 PSME2-215ENST00000560788 785 ntTSL 213.08□□□□□ -0.327e-14■□□□□ 9.4
SRSF1Q07955 PSME2-210ENST00000559493 702 ntTSL 25.08□□□□□ -1.67e-14■□□□□ 9.4
SRSF1Q07955 PSME2-211ENST00000559613 300 ntTSL 33.7□□□□□ -1.827e-14■□□□□ 9.4
SRSF1Q07955 SLC25A37-203ENST00000517923 573 ntTSL 412.81□□□□□ -0.363e-8■□□□□ 9.4
SRSF1Q07955 SLC25A37-208ENST00000520949 548 ntTSL 49.93□□□□□ -0.823e-8■□□□□ 9.4
SRSF1Q07955 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.85■□□□□ 0.136e-7■□□□□ 9.4
SRSF1Q07955 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.066e-7■□□□□ 9.4
SRSF1Q07955 AP1G2-209ENST00000554069 755 ntTSL 314.04□□□□□ -0.161e-7■□□□□ 9.4
SRSF1Q07955 AP1G2-233ENST00000557482 728 ntTSL 514.04□□□□□ -0.161e-7■□□□□ 9.4
SRSF1Q07955 AP1G2-226ENST00000556843 562 ntTSL 413.96□□□□□ -0.171e-7■□□□□ 9.4
SRSF1Q07955 WNK4-204ENST00000591448 3909 ntTSL 1 (best)9.87□□□□□ -0.832e-6■□□□□ 9.4
SRSF1Q07955 WNK4-201ENST00000246914 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.942e-6■□□□□ 9.4
SRSF1Q07955 MCM7-206ENST00000465688 481 ntTSL 317.27■□□□□ 0.366e-9■□□□□ 9.4
SRSF1Q07955 SUPT5H-211ENST00000598459 548 ntTSL 58.18□□□□□ -1.13e-8■□□□□ 9.4
SRSF1Q07955 SUPT5H-205ENST00000593727 493 ntTSL 36.14□□□□□ -1.433e-8■□□□□ 9.4
SRSF1Q07955 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.42■□□□□ 0.225e-15■□□□□ 9.4
SRSF1Q07955 ASGR1-206ENST00000573596 2083 ntTSL 515.07■□□□□ 05e-15■□□□□ 9.4
SRSF1Q07955 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.85□□□□□ -0.035e-15■□□□□ 9.4
SRSF1Q07955 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.315e-15■□□□□ 9.4
SRSF1Q07955 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.64□□□□□ -0.395e-15■□□□□ 9.4
SRSF1Q07955 ASGR1-205ENST00000573083 855 ntTSL 39.19□□□□□ -0.945e-15■□□□□ 9.4
SRSF1Q07955 HGD-210ENST00000494453 683 ntTSL 36.93□□□□□ -1.33e-10■□□□□ 9.4
SRSF1Q07955 HGD-204ENST00000475447 565 ntTSL 36.85□□□□□ -1.313e-10■□□□□ 9.4
SRSF1Q07955 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.353e-10■□□□□ 9.4
SRSF1Q07955 HGD-209ENST00000492108 631 ntTSL 26.51□□□□□ -1.373e-10■□□□□ 9.4
SRSF1Q07955 PHF19-207ENST00000456291 888 ntTSL 323.19■■□□□ 1.31e-8■□□□□ 9.4
SRSF1Q07955 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.39■□□□□ 0.211e-8■□□□□ 9.4
SRSF1Q07955 PHF19-204ENST00000436309 558 ntTSL 411.66□□□□□ -0.541e-8■□□□□ 9.4
SRSF1Q07955 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.454e-12■□□□□ 9.4
SRSF1Q07955 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC10.16□□□□□ -0.784e-12■□□□□ 9.4
SRSF1Q07955 DDX5-214ENST00000580026 1171 ntTSL 29.47□□□□□ -0.894e-12■□□□□ 9.4
SRSF1Q07955 DDX5-218ENST00000581693 2156 ntTSL 59.12□□□□□ -0.954e-12■□□□□ 9.4
SRSF1Q07955 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC9.09□□□□□ -0.954e-12■□□□□ 9.4
SRSF1Q07955 DDX5-203ENST00000540698 2225 ntTSL 58.79□□□□□ -14e-12■□□□□ 9.4
SRSF1Q07955 DDX5-209ENST00000578758 667 ntTSL 28.3□□□□□ -1.084e-12■□□□□ 9.4
SRSF1Q07955 DDX5-215ENST00000581230 3558 ntTSL 26.53□□□□□ -1.364e-12■□□□□ 9.4
SRSF1Q07955 DDX5-208ENST00000578491 463 ntTSL 26.46□□□□□ -1.384e-12■□□□□ 9.4
SRSF1Q07955 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.714e-6■□□□□ 9.4
SRSF1Q07955 FAM50A-207ENST00000494278 294 ntTSL 210.75□□□□□ -0.691e-7■□□□□ 9.4
SRSF1Q07955 COL27A1-202ENST00000451716 2865 ntTSL 1 (best)9.35□□□□□ -0.912e-9■□□□□ 9.4
SRSF1Q07955 TRMT2A-218ENST00000492988 854 ntTSL 516.52■□□□□ 0.243e-8■□□□□ 9.4
SRSF1Q07955 TRMT2A-209ENST00000463710 757 ntTSL 316.46■□□□□ 0.233e-8■□□□□ 9.4
SRSF1Q07955 TRMT2A-212ENST00000471040 848 ntTSL 316.46■□□□□ 0.233e-8■□□□□ 9.4
Retrieved 100 of 14,836 protein–RNA pairs in 273 ms