RNA–Protein interactions for RNA: ENST00000436309.5

PHF19-204, Transcript of PHD finger protein 19, humanhuman

TSL 4

Gene PHF19, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF19-204ENST00000436309 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
PHF19-204ENST00000436309 ABCC9O60706 1549 aa26.6■■□□□ 1.85
PHF19-204ENST00000436309 CCDC180Q9P1Z9 1646 aa26.32■■□□□ 1.8
PHF19-204ENST00000436309 DNAJC5BQ9UF47 199 aa25.21■■□□□ 1.63
PHF19-204ENST00000436309 RB1CC1Q8TDY2 1594 aa25.18■■□□□ 1.62
PHF19-204ENST00000436309 NACADO15069 1562 aa24.95■■□□□ 1.58
PHF19-204ENST00000436309 DCAF8L2P0C7V8 631 aa24.81■■□□□ 1.56
PHF19-204ENST00000436309 PABPN1Q86U42 306 aaKnown RBP eCLIP24.74■■□□□ 1.55
PHF19-204ENST00000436309 UNC13AQ9UPW8 1703 aa24.66■■□□□ 1.54
PHF19-204ENST00000436309 MYO15BQ96JP2 1530 aa24.51■■□□□ 1.51
PHF19-204ENST00000436309 BICRAQ9NZM4 1560 aa24.5■■□□□ 1.51
PHF19-204ENST00000436309 ZCCHC6Q5VYS8 1495 aaKnown RBP24.18■■□□□ 1.46
PHF19-204ENST00000436309 DCAF1Q9Y4B6 1507 aa24.12■■□□□ 1.45
PHF19-204ENST00000436309 SHROOM4Q9ULL8 1493 aa24.06■■□□□ 1.44
PHF19-204ENST00000436309 CC2D2AQ9P2K1 1620 aa24.01■■□□□ 1.43
PHF19-204ENST00000436309 SCRIBQ14160 1630 aa24■■□□□ 1.43
PHF19-204ENST00000436309 CECR2Q9BXF3 1484 aa23.96■■□□□ 1.43
PHF19-204ENST00000436309 EIF4G1Q04637 1599 aaKnown RBP23.89■■□□□ 1.41
PHF19-204ENST00000436309 DNAJC5Q9H3Z4 198 aa23.28■■□□□ 1.32
PHF19-204ENST00000436309 NCAPD3P42695 1498 aa23.05■■□□□ 1.28
PHF19-204ENST00000436309 CUX2O14529 1486 aa22.97■■□□□ 1.27
PHF19-204ENST00000436309 ATAD2BQ9ULI0 1458 aa22.95■■□□□ 1.26
PHF19-204ENST00000436309 ERCC6Q03468 1493 aa22.93■■□□□ 1.26
PHF19-204ENST00000436309 SMARCA4P51532 1647 aa22.87■■□□□ 1.25
PHF19-204ENST00000436309 SMARCA2P51531 1590 aa22.84■■□□□ 1.25
PHF19-204ENST00000436309 HMGXB3Q12766 1538 aa22.83■■□□□ 1.25
PHF19-204ENST00000436309 NESP48681 1621 aa22.8■■□□□ 1.24
PHF19-204ENST00000436309 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
PHF19-204ENST00000436309 BAZ1AQ9NRL2 1556 aaPredicted RBP22.7■■□□□ 1.22
PHF19-204ENST00000436309 PEG3Q9GZU2 1588 aa22.64■■□□□ 1.22
PHF19-204ENST00000436309 THOC2Q8NI27 1593 aaKnown RBP22.58■■□□□ 1.2
PHF19-204ENST00000436309 MROH2BQ7Z745 1585 aa22.56■■□□□ 1.2
PHF19-204ENST00000436309 LAMC3Q9Y6N6 1575 aa22.55■■□□□ 1.2
PHF19-204ENST00000436309 KIF21AQ7Z4S6 1674 aa22.48■■□□□ 1.19
PHF19-204ENST00000436309 PDS5BQ9NTI5 1447 aa22.42■■□□□ 1.18
PHF19-204ENST00000436309 CADPSQ9ULU8 1353 aa22.34■■□□□ 1.17
PHF19-204ENST00000436309 WIZO95785 1651 aa22.29■■□□□ 1.16
PHF19-204ENST00000436309 MRC2Q9UBG0 1479 aa22.25■■□□□ 1.15
PHF19-204ENST00000436309 WDR62O43379 1518 aa22.21■■□□□ 1.15
PHF19-204ENST00000436309 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
PHF19-204ENST00000436309 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
PHF19-204ENST00000436309 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
PHF19-204ENST00000436309 CFTRP13569 1480 aa22.03■■□□□ 1.12
PHF19-204ENST00000436309 RSF1Q96T23 1441 aaPredicted RBP22■■□□□ 1.11
PHF19-204ENST00000436309 TOP2AP11388 1531 aaKnown RBP21.95■■□□□ 1.1
PHF19-204ENST00000436309 URB2Q14146 1524 aaKnown RBP21.94■■□□□ 1.1
PHF19-204ENST00000436309 OSCARQ8IYS5 282 aa21.91■■□□□ 1.1
PHF19-204ENST00000436309 PRDM2Q13029 1718 aa21.79■■□□□ 1.08
PHF19-204ENST00000436309 CCDC88BA6NC98 1476 aa21.73■■□□□ 1.07
PHF19-204ENST00000436309 ZNF608Q9ULD9 1512 aaPredicted RBP21.71■■□□□ 1.07
PHF19-204ENST00000436309 IFT140Q96RY7 1462 aa21.68■■□□□ 1.06
PHF19-204ENST00000436309 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
PHF19-204ENST00000436309 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
PHF19-204ENST00000436309 RIMBP3Q9UFD9 1639 aa21.66■■□□□ 1.06
PHF19-204ENST00000436309 TOPBP1Q92547 1522 aa21.65■■□□□ 1.06
PHF19-204ENST00000436309 ARHGEF11O15085 1522 aa21.56■■□□□ 1.04
PHF19-204ENST00000436309 EIF4G3O43432 1585 aaKnown RBP21.55■■□□□ 1.04
PHF19-204ENST00000436309 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
PHF19-204ENST00000436309 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
PHF19-204ENST00000436309 AQRO60306 1485 aaKnown RBP eCLIP21.49■■□□□ 1.033e-7■■■□□ 18.3
PHF19-204ENST00000436309 TARBP1Q13395 1621 aaKnown RBP21.48■■□□□ 1.03
PHF19-204ENST00000436309 CHD1O14646 1710 aa21.46■■□□□ 1.03
PHF19-204ENST00000436309 CYB5RLQ6IPT4 315 aa21.44■■□□□ 1.02
PHF19-204ENST00000436309 POLA1P09884 1462 aaPredicted RBP21.41■■□□□ 1.02
PHF19-204ENST00000436309 FBLN2P98095 1184 aa21.37■■□□□ 1.01
PHF19-204ENST00000436309 RAD54L2Q9Y4B4 1467 aa21.36■■□□□ 1.01
PHF19-204ENST00000436309 ARAP1Q96P48 1450 aa21.34■■□□□ 1.01
PHF19-204ENST00000436309 TDRD9Q8NDG6 1382 aaKnown RBP21.32■■□□□ 1
PHF19-204ENST00000436309 SOGA1O94964 1423 aa21.31■■□□□ 1
PHF19-204ENST00000436309 FGD5Q6ZNL6 1462 aa21.25■□□□□ 0.99
PHF19-204ENST00000436309 TRHP20396 242 aaPredicted RBP21.24■□□□□ 0.99
PHF19-204ENST00000436309 SNAPC4Q5SXM2 1469 aa21.23■□□□□ 0.99
PHF19-204ENST00000436309 CUX1P39880 1505 aa21.2■□□□□ 0.98
PHF19-204ENST00000436309 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
PHF19-204ENST00000436309 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
PHF19-204ENST00000436309 CHMP7Q8WUX9 453 aaPredicted RBP21.16■□□□□ 0.98
PHF19-204ENST00000436309 MAGI1Q96QZ7 1491 aaPredicted RBP21.14■□□□□ 0.98
PHF19-204ENST00000436309 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
PHF19-204ENST00000436309 SYNJ1O43426 1573 aa21.13■□□□□ 0.97
PHF19-204ENST00000436309 SYNJ2O15056 1496 aa21.09■□□□□ 0.97
PHF19-204ENST00000436309 PBRM1Q86U86 1689 aa21.05■□□□□ 0.96
PHF19-204ENST00000436309 GAPVD1Q14C86 1478 aa21.03■□□□□ 0.96
PHF19-204ENST00000436309 ABCA5Q8WWZ7 1642 aa20.98■□□□□ 0.95
PHF19-204ENST00000436309 ABCA10Q8WWZ4 1543 aa20.98■□□□□ 0.95
PHF19-204ENST00000436309 ERCC6L2Q5T890 1561 aa20.89■□□□□ 0.93
PHF19-204ENST00000436309 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
PHF19-204ENST00000436309 SUPT5HO00267 1087 aaKnown RBP20.86■□□□□ 0.93
PHF19-204ENST00000436309 WRNQ14191 1432 aaPredicted RBP eCLIP20.84■□□□□ 0.93
PHF19-204ENST00000436309 CEP170Q5SW79 1584 aa20.83■□□□□ 0.92
PHF19-204ENST00000436309 ADAMTS12P58397 1594 aa20.82■□□□□ 0.92
PHF19-204ENST00000436309 NUP160Q12769 1436 aa20.81■□□□□ 0.92
PHF19-204ENST00000436309 TOP2BQ02880 1626 aa20.78■□□□□ 0.92
PHF19-204ENST00000436309 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
PHF19-204ENST00000436309 AEBP2Q6ZN18 517 aaPredicted RBP20.78■□□□□ 0.92
PHF19-204ENST00000436309 SHROOM2Q13796 1616 aa20.75■□□□□ 0.91
PHF19-204ENST00000436309 FHAD1B1AJZ9 1412 aa20.75■□□□□ 0.91
PHF19-204ENST00000436309 ERICH3Q5RHP9 1530 aa20.7■□□□□ 0.9
PHF19-204ENST00000436309 PRG4Q92954 1404 aaPredicted RBP20.64■□□□□ 0.89
PHF19-204ENST00000436309 KIF13AQ9H1H9 1805 aa20.62■□□□□ 0.89
PHF19-204ENST00000436309 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms